RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 TXKP42681 527 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 NRIP1P48552 1158 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
TSC2-223ENST00000568566 ADAM17P78536 824 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 CEBPZQ03701 1054 aaKnown RBP9.42□□□□□ -0.9
TSC2-223ENST00000568566 SPIRE1Q08AE8 756 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 MGAT3Q09327 533 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 NEDD9Q14511 834 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 SAFBQ15424 915 aaKnown RBP eCLIP9.42□□□□□ -0.9
TSC2-223ENST00000568566 PAN2Q504Q3 1202 aaKnown RBP9.42□□□□□ -0.9
TSC2-223ENST00000568566 TAF2Q6P1X5 1199 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 ABHD15Q6UXT9 468 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 BMP8AQ7Z5Y6 402 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 RBM23Q86U06 439 aaKnown RBP9.42□□□□□ -0.9
TSC2-223ENST00000568566 CCDC60Q8IWA6 550 aaPredicted RBP9.42□□□□□ -0.9
TSC2-223ENST00000568566 FAM177A1Q8N128 213 aaPredicted RBP9.42□□□□□ -0.9
TSC2-223ENST00000568566 FBXL6Q8N531 539 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 EFHBQ8N7U6 833 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 TRAPPC12Q8WVT3 735 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 LINC01599Q8WXQ3 324 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 PPP2R3CQ969Q6 453 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 ZNF689Q96CS4 500 aaPredicted RBP9.42□□□□□ -0.9
TSC2-223ENST00000568566 MTMR9Q96QG7 549 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 SENP7Q9BQF6 1050 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 SH2D3AQ9BRG2 576 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 PLVAPQ9BX97 442 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 BRMS1Q9HCU9 246 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.42□□□□□ -0.9
TSC2-223ENST00000568566 SLC9A2Q9UBY0 812 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 DAXXQ9UER7 740 aaPredicted RBP9.42□□□□□ -0.9
TSC2-223ENST00000568566 USP15Q9Y4E8 981 aaPredicted RBP9.42□□□□□ -0.9
TSC2-223ENST00000568566 CACNA1AO00555 2505 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 FAM186AA6NE01 2351 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 WDR87Q6ZQQ6 2873 aa9.42□□□□□ -0.9
TSC2-223ENST00000568566 NRCAMQ92823 1304 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 LOC730098B7Z3J9 87 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 ZNF862O60290 1169 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 DGKIO75912 1065 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 STBD1O95210 358 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 ATG7O95352 703 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 GLP2RO95838 553 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 HSP90AA1P07900 732 aaKnown RBP9.41□□□□□ -0.9
TSC2-223ENST00000568566 IBSPP21815 317 aaPredicted RBP9.41□□□□□ -0.9
TSC2-223ENST00000568566 CDC25AP30304 524 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 CD52P31358 61 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 RBM10P98175 930 aaKnown RBP9.41□□□□□ -0.9
TSC2-223ENST00000568566 COASYQ13057 564 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 PPFIA1Q13136 1202 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 PTGDRQ13258 359 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 GNL2Q13823 731 aaKnown RBP9.41□□□□□ -0.9
TSC2-223ENST00000568566 FBXO47Q5MNV8 452 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 LRCH2Q5VUJ6 765 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 MCTP2Q6DN12 878 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 PPP4R3AQ6IN85 833 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 SWSAP1Q6NVH7 229 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 RSPH3Q86UC2 560 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 ZNF579Q8NAF0 562 aaKnown RBP9.41□□□□□ -0.9
TSC2-223ENST00000568566 KLHL23Q8NBE8 558 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 DNAJB3Q8WWF6 145 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 RPGRIP1Q96KN7 1286 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 USP28Q96RU2 1077 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 PRRX2Q99811 253 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 FAM49AQ9H0Q0 323 aaPredicted RBP9.41□□□□□ -0.9
TSC2-223ENST00000568566 JPH1Q9HDC5 661 aaPredicted RBP9.41□□□□□ -0.9
TSC2-223ENST00000568566 RGL1Q9NZL6 768 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 TUBE1Q9UJT0 475 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 CDY2AQ9Y6F7 541 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 GVINP1Q7Z2Y8 2422 aa9.41□□□□□ -0.9
TSC2-223ENST00000568566 PLXNA4Q9HCM2 1894 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 NFASCO94856 1347 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 VPS13AQ96RL7 3174 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 POTEMA6NI47 508 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 GAS7O60861 476 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 ZSCAN22P10073 491 aaPredicted RBP9.4□□□□□ -0.9
TSC2-223ENST00000568566 GATMP50440 423 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 IGBP1P78318 339 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 SIGLEC14Q08ET2 396 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 CBX2Q14781 532 aaPredicted RBP9.4□□□□□ -0.9
TSC2-223ENST00000568566 PLCB4Q15147 1175 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 PTPAQ15257 358 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 GRIK4Q16099 956 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 CALCRLQ16602 461 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 ECM1Q16610 540 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 MOXD1Q6UVY6 613 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 TSHZ1Q6ZSZ6 1077 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 USP49Q70CQ1 688 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 TEX2Q8IWB9 1127 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 CMTR2Q8IYT2 770 aaKnown RBP9.4□□□□□ -0.9
TSC2-223ENST00000568566 SPPL3Q8TCT6 385 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 POF1BQ8WVV4 589 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 SEPT1Q8WYJ6 367 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 P2RX5Q93086 422 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 SDF4Q9BRK5 362 aa9.4□□□□□ -0.9
TSC2-223ENST00000568566 AGO3Q9H9G7 860 aaKnown RBP9.4□□□□□ -0.9
TSC2-223ENST00000568566 DMDP11532 3685 aa9.39□□□□□ -0.91
TSC2-223ENST00000568566 IGKV6D-21A0A0A0MT36 114 aa9.39□□□□□ -0.91
TSC2-223ENST00000568566 PER2O15055 1255 aa9.39□□□□□ -0.91
TSC2-223ENST00000568566 MAFGO15525 162 aa9.39□□□□□ -0.91
TSC2-223ENST00000568566 NEMFO60524 1076 aa9.39□□□□□ -0.91
TSC2-223ENST00000568566 BRD1O95696 1058 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms