RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CTAGE15A4D2H0 777 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 STAM2O75886 525 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 CTAGE8P0CG41 777 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 ZSCAN20P17040 1043 aaPredicted RBP19.83■□□□□ 0.76
SMPD3-211ENST00000568373 ARID5AQ03989 594 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 PPP2R5AQ15172 486 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 SLC18A3Q16572 532 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 XKR9Q5GH70 373 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 CTAGE6Q86UF2 777 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 CTAGE4Q8IX94 777 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 SMAP1Q8IYB5 467 aaPredicted RBP19.83■□□□□ 0.76
SMPD3-211ENST00000568373 TMEM174Q8WUU8 243 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 ACCSQ96QU6 501 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 ST6GALNAC4Q9H4F1 302 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 ZNF446Q9NWS9 450 aa19.83■□□□□ 0.76
SMPD3-211ENST00000568373 DDX41Q9UJV9 622 aaKnown RBP19.83■□□□□ 0.76
SMPD3-211ENST00000568373 TACC1O75410 805 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 GPR162Q16538 588 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 PLA2G4FQ68DD2 849 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 DLK2Q6UY11 383 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 MLXIPQ9HAP2 919 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 LUC7LQ9NQ29 371 aaKnown RBP19.82■□□□□ 0.76
SMPD3-211ENST00000568373 CAPN6Q9Y6Q1 641 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 PAPPA2Q9BXP8 1791 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 NFASCO94856 1347 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 EXOC3O60645 756 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 FMO5P49326 533 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 NPEPPSP55786 919 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 GTF2BQ00403 316 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 ANO5Q75V66 913 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 TRMT1LQ7Z2T5 733 aaKnown RBP19.82■□□□□ 0.76
SMPD3-211ENST00000568373 IRF2BP2Q7Z5L9 587 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 SULF1Q8IWU6 871 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 DCPSQ96C86 337 aaKnown RBP19.82■□□□□ 0.76
SMPD3-211ENST00000568373 GPRC5CQ9NQ84 441 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 CSADQ9Y600 493 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 LCTP09848 1927 aa19.82■□□□□ 0.76
SMPD3-211ENST00000568373 OTOFQ9HC10 1997 aa19.81■□□□□ 0.76
SMPD3-211ENST00000568373 GNPTABQ3T906 1256 aa19.81■□□□□ 0.76
SMPD3-211ENST00000568373 TREML2Q5T2D2 321 aa19.81■□□□□ 0.76
SMPD3-211ENST00000568373 HAUS6Q7Z4H7 955 aa19.81■□□□□ 0.76
SMPD3-211ENST00000568373 C12orf56Q8IXR9 622 aa19.81■□□□□ 0.76
SMPD3-211ENST00000568373 CHST13Q8NET6 341 aa19.81■□□□□ 0.76
SMPD3-211ENST00000568373 JPH1Q9HDC5 661 aaPredicted RBP19.81■□□□□ 0.76
SMPD3-211ENST00000568373 JRKLQ9Y4A0 524 aa19.81■□□□□ 0.76
SMPD3-211ENST00000568373 BZW2Q9Y6E2 419 aaKnown RBP19.81■□□□□ 0.76
SMPD3-211ENST00000568373 MYH10P35580 1976 aa19.81■□□□□ 0.76
SMPD3-211ENST00000568373 ADM5C9JUS6 153 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 MOCS3O95396 460 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 NCKAP1LP55160 1127 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 PEX3P56589 373 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 JAM2P57087 298 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 BFSP1Q12934 665 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 SLC17A8Q8NDX2 589 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 ATP6V0A1Q93050 837 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 PARD6BQ9BYG5 372 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 RNF181Q9P0P0 153 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 GABBR1Q9UBS5 961 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 A0A087X0T9 212 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 SPATA31C2B4DYI2 1134 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 DKC1O60832 514 aaKnown RBP eCLIP19.8■□□□□ 0.76
SMPD3-211ENST00000568373 FAM228BP0C875 321 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 ENOX2Q16206 610 aaKnown RBP19.8■□□□□ 0.76
SMPD3-211ENST00000568373 FAM102BQ5T8I3 360 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 LBX2Q6XYB7 198 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 OTUD6AQ7L8S5 288 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 CNKSR2Q8WXI2 1034 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 ALS2CR12Q96Q35 445 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 IWS1Q96ST2 819 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.8■□□□□ 0.76
SMPD3-211ENST00000568373 ADAMTS1Q9UHI8 967 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 SALL4Q9UJQ4 1053 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 DOCK5Q9H7D0 1870 aa19.8■□□□□ 0.76
SMPD3-211ENST00000568373 SPDYE4A6NLX3 237 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 ZNF862O60290 1169 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 PSAPP07602 524 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 PRKCIP41743 596 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 SNRPFP62306 86 aaKnown RBP19.79■□□□□ 0.76
SMPD3-211ENST00000568373 PTK2Q05397 1052 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 TMCO3Q6UWJ1 677 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 RNF10Q8N5U6 811 aaKnown RBP19.79■□□□□ 0.76
SMPD3-211ENST00000568373 OGFRQ9NZT2 677 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 SLC9A2Q9UBY0 812 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 AJAP1Q9UKB5 411 aaPredicted RBP19.79■□□□□ 0.76
SMPD3-211ENST00000568373 A0A0G2JMZ2 1700 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 SLC16A4O15374 487 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 SRGAP2O75044 1071 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 TRIM49P0CI25 452 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 TRIM49CP0CI26 452 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 CBWD6Q4V339 395 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 CBWD3Q5JTY5 395 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 CBWD5Q5RIA9 395 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 IQCEQ6IPM2 695 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 ANKRD13CQ8N6S4 541 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 DNERQ8NFT8 737 aa19.79■□□□□ 0.76
SMPD3-211ENST00000568373 TISP43B9A030 160 aa19.78■□□□□ 0.76
SMPD3-211ENST00000568373 POTEB2H3BUK9 544 aa19.78■□□□□ 0.76
SMPD3-211ENST00000568373 STBD1O95210 358 aa19.78■□□□□ 0.76
SMPD3-211ENST00000568373 GJB7Q6PEY0 223 aa19.78■□□□□ 0.76
SMPD3-211ENST00000568373 INTS8Q75QN2 995 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms