RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 EDAQ92838 391 aa18.65■□□□□ 0.58
TSR3-202ENST00000566296 LENG9Q96B70 501 aa18.65■□□□□ 0.58
TSR3-202ENST00000566296 FBXL18Q96ME1 805 aa18.65■□□□□ 0.58
TSR3-202ENST00000566296 ZNF558Q96NG5 402 aa18.65■□□□□ 0.58
TSR3-202ENST00000566296 TEKT3Q9BXF9 490 aa18.65■□□□□ 0.58
TSR3-202ENST00000566296 VPS54Q9P1Q0 977 aa18.65■□□□□ 0.58
TSR3-202ENST00000566296 SNX14Q9Y5W7 946 aa18.65■□□□□ 0.58
TSR3-202ENST00000566296 C5orf42Q9H799 3197 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 LOC730098B7Z3J9 87 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 ATF7P17544 494 aaPredicted RBP18.64■□□□□ 0.57
TSR3-202ENST00000566296 RPS6KB1P23443 525 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 EIF4BP23588 611 aaKnown RBP18.64■□□□□ 0.57
TSR3-202ENST00000566296 PSMA5P28066 241 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 PLCB3Q01970 1234 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 TBC1D8BQ0IIM8 1120 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 LRCH2Q5VUJ6 765 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 LINC01465Q8N7H1 131 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 RNF169Q8NCN4 708 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 RIT2Q99578 217 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 TCF25Q9BQ70 676 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 C22orf23Q9BZE7 217 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 ADAMTS10Q9H324 1103 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 NGRNQ9NPE2 291 aaKnown RBP18.64■□□□□ 0.57
TSR3-202ENST00000566296 ZDBF2Q9HCK1 2354 aa18.64■□□□□ 0.57
TSR3-202ENST00000566296 MSH4O15457 936 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 ZNF862O60290 1169 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 IFNAR1P17181 557 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 GPC3P51654 580 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 NLRP5P59047 1200 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 NHLH1Q02575 133 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 KRT17Q04695 432 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 CBX2Q14781 532 aaPredicted RBP18.63■□□□□ 0.57
TSR3-202ENST00000566296 KCNT2Q6UVM3 1135 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 ECHDC2Q86YB7 292 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 FBXL16Q8N461 479 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 VN1R2Q8NFZ6 395 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 NLRP7Q8WX94 980 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 RPGRIP1Q96KN7 1286 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 CASD1Q96PB1 797 aa18.63■□□□□ 0.57
TSR3-202ENST00000566296 TMEM221A6NGB7 291 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 M0R296 226 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 DARSP14868 501 aaKnown RBP18.62■□□□□ 0.57
TSR3-202ENST00000566296 TECP42680 631 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 USP11P51784 963 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 RBM10P98175 930 aaKnown RBP18.62■□□□□ 0.57
TSR3-202ENST00000566296 NTRK3Q16288 839 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 TRIM67Q6ZTA4 783 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 SUGP1Q8IWZ8 645 aaKnown RBP18.62■□□□□ 0.57
TSR3-202ENST00000566296 TRIM22Q8IYM9 498 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 RDM1Q8NG50 284 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 SUSD6Q92537 303 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 SLC5A5Q92911 643 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 ZNF668Q96K58 619 aaPredicted RBP18.62■□□□□ 0.57
TSR3-202ENST00000566296 AGXT2Q9BYV1 514 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 UNC45AQ9H3U1 944 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 SH3GLB2Q9NR46 395 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 RNF19AQ9NV58 838 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 DACT1Q9NYF0 836 aa18.62■□□□□ 0.57
TSR3-202ENST00000566296 SEPT9Q9UHD8 586 aaPredicted RBP18.62■□□□□ 0.57
TSR3-202ENST00000566296 REC8O95072 547 aa18.61■□□□□ 0.57
TSR3-202ENST00000566296 CCT2P78371 535 aaKnown RBP18.61■□□□□ 0.57
TSR3-202ENST00000566296 ZXDAP98168 799 aa18.61■□□□□ 0.57
TSR3-202ENST00000566296 UGCGQ16739 394 aa18.61■□□□□ 0.57
TSR3-202ENST00000566296 ANKRD54Q6NXT1 300 aa18.61■□□□□ 0.57
TSR3-202ENST00000566296 MIER3Q7Z3K6 550 aa18.61■□□□□ 0.57
TSR3-202ENST00000566296 BMP8AQ7Z5Y6 402 aa18.61■□□□□ 0.57
TSR3-202ENST00000566296 MRPL9Q9BYD2 267 aaKnown RBP18.61■□□□□ 0.57
TSR3-202ENST00000566296 SPG21Q9NZD8 308 aa18.61■□□□□ 0.57
TSR3-202ENST00000566296 PBX3P40426 434 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 MRE11P49959 708 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 BMS1Q14692 1282 aaKnown RBP18.6■□□□□ 0.57
TSR3-202ENST00000566296 MTERF2Q49AM1 385 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 LLGL2Q6P1M3 1020 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 TMEM184AQ6ZMB5 413 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 LRRC55Q6ZSA7 311 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 TMC7Q7Z402 723 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 TBCKQ8TEA7 893 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 CASP10Q92851 521 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 PBXIP1Q96AQ6 731 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 GCOM2Q9BZD3 368 aaPredicted RBP18.6■□□□□ 0.57
TSR3-202ENST00000566296 NCOA5Q9HCD5 579 aaKnown RBP18.6■□□□□ 0.57
TSR3-202ENST00000566296 PCDHA4Q9UN74 947 aa18.6■□□□□ 0.57
TSR3-202ENST00000566296 A0A0U1RQF3 1178 aa18.59■□□□□ 0.57
TSR3-202ENST00000566296 EOMESO95936 686 aa18.59■□□□□ 0.57
TSR3-202ENST00000566296 HOXB8P17481 243 aaPredicted RBP18.59■□□□□ 0.57
TSR3-202ENST00000566296 FGFR4P22455 802 aa18.59■□□□□ 0.57
TSR3-202ENST00000566296 SFPQP23246 707 aaKnown RBP eCLIP18.59■□□□□ 0.57
TSR3-202ENST00000566296 PDIA3P30101 505 aaKnown RBP18.59■□□□□ 0.57
TSR3-202ENST00000566296 CA8P35219 290 aa18.59■□□□□ 0.57
TSR3-202ENST00000566296 CDC42EP1Q00587 391 aa18.59■□□□□ 0.57
TSR3-202ENST00000566296 SMC1AQ14683 1233 aaKnown RBP18.59■□□□□ 0.57
TSR3-202ENST00000566296 Q4G0T1 1027 aa18.59■□□□□ 0.57
TSR3-202ENST00000566296 XKR3Q5GH77 459 aa18.59■□□□□ 0.57
TSR3-202ENST00000566296 CLLU1OSQ5K130 101 aa18.59■□□□□ 0.57
TSR3-202ENST00000566296 HELQQ8TDG4 1101 aa18.59■□□□□ 0.57
TSR3-202ENST00000566296 HIDE1A8MVS5 230 aa18.58■□□□□ 0.56
TSR3-202ENST00000566296 CPLX1O14810 134 aa18.58■□□□□ 0.56
TSR3-202ENST00000566296 DNM2P50570 870 aa18.58■□□□□ 0.56
TSR3-202ENST00000566296 SSRP1Q08945 709 aaKnown RBP18.58■□□□□ 0.56
TSR3-202ENST00000566296 SIGLEC14Q08ET2 396 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms