RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 CTNNB1P35222 781 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 CTTNQ14247 550 aaKnown RBP13.74□□□□□ -0.21
SPG7-211ENST00000565370 SKIV2LQ15477 1246 aaKnown RBP13.74□□□□□ -0.21
SPG7-211ENST00000565370 PTPROQ16827 1216 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 TPH2Q8IWU9 490 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 TCP11Q8WWU5 503 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 PSPC1Q8WXF1 523 aaKnown RBP13.74□□□□□ -0.21
SPG7-211ENST00000565370 C17orf80Q9BSJ5 609 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 CDHR5Q9HBB8 845 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 LMCD1Q9NZU5 365 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 RAPGEFL1Q9UHV5 662 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 SMC3Q9UQE7 1217 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 MTCH2Q9Y6C9 303 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 TTC28Q96AY4 2481 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 POTEMA6NI47 508 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 RFXAPO00287 272 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 STBD1O95210 358 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 DARSP14868 501 aaKnown RBP13.73□□□□□ -0.21
SPG7-211ENST00000565370 COL9A1P20849 921 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 GJB2P29033 226 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 EMC2Q15006 297 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 CCDC85BQ15834 202 aaPredicted RBP13.73□□□□□ -0.21
SPG7-211ENST00000565370 EPC2Q52LR7 807 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 XKR9Q5GH70 373 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 MCTP1Q6DN14 999 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 SLC24A5Q71RS6 500 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 SPRED2Q7Z698 418 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 RHPN2Q8IUC4 686 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 SYMPKQ92797 1274 aaKnown RBP13.73□□□□□ -0.21
SPG7-211ENST00000565370 NLRP4Q96MN2 994 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 MTMR9Q96QG7 549 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 MTRQ99707 1265 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 ADAM2Q99965 735 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 SH2D3AQ9BRG2 576 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 C11orf84Q9BUA3 381 aaPredicted RBP13.73□□□□□ -0.21
SPG7-211ENST00000565370 RAB34Q9BZG1 259 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 ADAMTS10Q9H324 1103 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 TMX1Q9H3N1 280 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 RC3H2Q9HBD1 1191 aaKnown RBP13.73□□□□□ -0.21
SPG7-211ENST00000565370 RGS18Q9NS28 235 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 DACT1Q9NYF0 836 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 RGL1Q9NZL6 768 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 SUCLA2Q9P2R7 463 aaPredicted RBP13.73□□□□□ -0.21
SPG7-211ENST00000565370 PCDHB7Q9Y5E2 793 aa13.73□□□□□ -0.21
SPG7-211ENST00000565370 TRANK1O15050 2925 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 WNT7AO00755 349 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 HOXA2O43364 376 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 DGKIO75912 1065 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 LYPLA2O95372 231 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 U2AF2P26368 475 aaKnown RBP eCLIP13.72□□□□□ -0.21
SPG7-211ENST00000565370 NPEPPSP55786 919 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 TIGD5Q53EQ6 642 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 TMEM192Q8IY95 271 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 ZNF689Q96CS4 500 aaPredicted RBP13.72□□□□□ -0.21
SPG7-211ENST00000565370 ZNF668Q96K58 619 aaPredicted RBP13.72□□□□□ -0.21
SPG7-211ENST00000565370 CEP89Q96ST8 783 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
SPG7-211ENST00000565370 ATP6V0A4Q9HBG4 840 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 TUFT1Q9NNX1 390 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 WRAP73Q9P2S5 460 aaPredicted RBP13.72□□□□□ -0.21
SPG7-211ENST00000565370 COL4A3BPQ9Y5P4 624 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 MUC3AQ02505 3323 aa13.72□□□□□ -0.21
SPG7-211ENST00000565370 KIAA1671Q9BY89 1806 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 PRRC2BQ5JSZ5 2229 aaKnown RBP13.71□□□□□ -0.21
SPG7-211ENST00000565370 A0A087WZ62 844 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 C9IYK1 514 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 RBAK-RBAKDNI3L0D1 243 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 LAD1O00515 517 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 MGEA5O60502 916 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 DGAT1O75907 488 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 CD2BP2O95400 341 aaKnown RBP13.71□□□□□ -0.21
SPG7-211ENST00000565370 RB1P06400 928 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 DRP2Q13474 957 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 ZNF174Q15697 407 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 PAN2Q504Q3 1202 aaKnown RBP13.71□□□□□ -0.21
SPG7-211ENST00000565370 ABI1Q8IZP0 508 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 FDXACB1Q9BRP7 624 aaPredicted RBP13.71□□□□□ -0.21
SPG7-211ENST00000565370 PLVAPQ9BX97 442 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 TMEM60Q9H2L4 133 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 ELAC1Q9H777 363 aaKnown RBP13.71□□□□□ -0.21
SPG7-211ENST00000565370 BMP2KQ9NSY1 1161 aaPredicted RBP13.71□□□□□ -0.21
SPG7-211ENST00000565370 ANKEF1Q9NU02 776 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 TMEM161AQ9NX61 479 aa13.71□□□□□ -0.21
SPG7-211ENST00000565370 H3BNC9 293 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 ASAP2O43150 1006 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 LPXNO60711 386 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 SLITRK3O94933 977 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 TECP42680 631 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 PHKA2P46019 1235 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 GPM6BQ13491 265 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 TFDP1Q14186 410 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 MXD4Q14582 209 aaPredicted RBP13.7□□□□□ -0.22
SPG7-211ENST00000565370 AAK1Q2M2I8 961 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 RILPL1Q5EBL4 403 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 TJAP1Q5JTD0 557 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 SPOUT1Q5T280 376 aaKnown RBP13.7□□□□□ -0.22
SPG7-211ENST00000565370 CATSPER4Q7RTX7 472 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 RTN4RL1Q86UN2 441 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms