RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TXKP42681 527 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 PTK2Q05397 1052 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 SOGA3Q5TF21 947 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.64■□□□□ 0.41
LINC00554-201ENST00000564841 CERS5Q8N5B7 392 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 CRAMP1Q96RY5 1269 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 CCSER1Q9C0I3 900 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 SEMA4AQ9H3S1 761 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 COL24A1Q17RW2 1714 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 RGS16O15492 202 aaPredicted RBP17.63■□□□□ 0.41
LINC00554-201ENST00000564841 CALM1P0DP23 149 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 CALM2P0DP24 149 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 CALM3P0DP25 149 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 PPP1R15BQ5SWA1 713 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 RMDN2Q96LZ7 410 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 ZNF831Q5JPB2 1677 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 FGGP02679 453 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 FGFR4P22455 802 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 HOXA10P31260 410 aaPredicted RBP17.63■□□□□ 0.41
LINC00554-201ENST00000564841 COPS2P61201 443 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 AKT1S1Q96B36 256 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 FGFBP2Q9BYJ0 223 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 PCDHA4Q9UN74 947 aa17.63■□□□□ 0.41
LINC00554-201ENST00000564841 FRMPD2Q68DX3 1309 aaPredicted RBP17.62■□□□□ 0.41
LINC00554-201ENST00000564841 NEFHP12036 1026 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 RCAN1P53805 252 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 MXRA7P84157 204 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 ZNF211Q13398 564 aaPredicted RBP17.62■□□□□ 0.41
LINC00554-201ENST00000564841 RNF220Q5VTB9 566 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 SP8Q8IXZ3 490 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 EYA3Q99504 573 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 ERVK-5Q9HDB9 667 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 DAGLAQ9Y4D2 1042 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 FESP07332 822 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 IL1R1P14778 569 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 CDK8P49336 464 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 NAPAP54920 295 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 TBC1D25Q3MII6 688 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 AADACL2Q6P093 401 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 ZNF571Q7Z3V5 609 aaPredicted RBP17.62■□□□□ 0.41
LINC00554-201ENST00000564841 LONP2Q86WA8 852 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 GDAP1Q8TB36 358 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 FBXO25Q8TCJ0 367 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 ACTRT1Q8TDG2 376 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 CENPTQ96BT3 561 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 PBKQ96KB5 322 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 MMTAG2Q9BU76 263 aaKnown RBP17.62■□□□□ 0.41
LINC00554-201ENST00000564841 ZMYND12Q9H0C1 365 aa17.62■□□□□ 0.41
LINC00554-201ENST00000564841 UTP11Q9Y3A2 253 aaKnown RBP17.62■□□□□ 0.41
LINC00554-201ENST00000564841 BHMG1C9JSJ3 638 aaPredicted RBP17.61■□□□□ 0.41
LINC00554-201ENST00000564841 TRAF5O00463 557 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 ZBTB48P10074 688 aaPredicted RBP17.61■□□□□ 0.41
LINC00554-201ENST00000564841 PCK1P35558 622 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 USP4Q13107 963 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 NUGGCQ68CJ6 796 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 CWF19L1Q69YN2 538 aaKnown RBP17.61■□□□□ 0.41
LINC00554-201ENST00000564841 CNNM4Q6P4Q7 775 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 PEX26Q7Z412 305 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 NELFCDQ8IXH7 590 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 LRRC57Q8N9N7 239 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 DYDC1Q8WWB3 177 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 UTP4Q969X6 686 aaKnown RBP17.61■□□□□ 0.41
LINC00554-201ENST00000564841 C7orf25Q9BPX7 421 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 MAD2L2Q9UI95 211 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 NPR1P16066 1061 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 ANKRD42Q8N9B4 389 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 PHC3Q8NDX5 983 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 TEKT4Q8WW24 435 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 TCP11L1Q9NUJ3 509 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 PPFIA2O75334 1257 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 RASA1P20936 1047 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 PMS2P54278 862 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 CACNB1Q02641 598 aaPredicted RBP17.61■□□□□ 0.41
LINC00554-201ENST00000564841 BNIP1Q12981 228 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 GALNTL6Q49A17 601 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 SBK1Q52WX2 424 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 DEFB132Q7Z7B7 95 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 TMEM237Q96Q45 408 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 USP40Q9NVE5 1235 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 CEP72Q9P209 647 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 C2CD2Q9Y426 696 aa17.61■□□□□ 0.41
LINC00554-201ENST00000564841 STXBP3O00186 592 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 GH1P01241 217 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 KIF5BP33176 963 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 FAM47EQ6ZV65 393 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 RPS6KC1Q96S38 1066 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 TMEM47Q9BQJ4 181 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 TXLNGYQ9BZA5 131 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 ARHGEF3Q9NR81 526 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 USP15Q9Y4E8 981 aaPredicted RBP17.6■□□□□ 0.41
LINC00554-201ENST00000564841 KLRF2D3W0D1 207 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 PLSCR1O15162 318 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 AHCYL1O43865 530 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 GM2AP17900 193 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 PLS1Q14651 629 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 PPP2R5BQ15173 497 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 CNGA2Q16280 664 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 DENND2CQ68D51 928 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 LRRC47Q8N1G4 583 aaKnown RBP17.6■□□□□ 0.41
LINC00554-201ENST00000564841 ANKLE1Q8NAG6 615 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms