RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 NT5C3AQ9H0P0 336 aa20.37■□□□□ 0.85
PKD1-227ENST00000564313 ATP6V0A4Q9HBG4 840 aa20.37■□□□□ 0.85
PKD1-227ENST00000564313 GPR32O75388 356 aa20.36■□□□□ 0.85
PKD1-227ENST00000564313 NLRP11P59045 1033 aaKnown RBP20.36■□□□□ 0.85
PKD1-227ENST00000564313 PTPAQ15257 358 aa20.36■□□□□ 0.85
PKD1-227ENST00000564313 KIZQ2M2Z5 673 aa20.36■□□□□ 0.85
PKD1-227ENST00000564313 ATL3Q6DD88 541 aa20.36■□□□□ 0.85
PKD1-227ENST00000564313 POTEGQ6S5H5 508 aa20.36■□□□□ 0.85
PKD1-227ENST00000564313 ZNF410Q86VK4 478 aa20.36■□□□□ 0.85
PKD1-227ENST00000564313 PIGOQ8TEQ8 1089 aa20.36■□□□□ 0.85
PKD1-227ENST00000564313 GAS2L1Q99501 681 aaPredicted RBP20.36■□□□□ 0.85
PKD1-227ENST00000564313 FTHL17Q9BXU8 183 aa20.36■□□□□ 0.85
PKD1-227ENST00000564313 SUCLA2Q9P2R7 463 aaPredicted RBP20.36■□□□□ 0.85
PKD1-227ENST00000564313 GINS2Q9Y248 185 aa20.36■□□□□ 0.85
PKD1-227ENST00000564313 CLIC4Q9Y696 253 aa20.36■□□□□ 0.85
PKD1-227ENST00000564313 GRXCR1A8MXD5 290 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 RBAK-RBAKDNI3L0D1 243 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 ZBTB39O15060 712 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 ASAP2O43150 1006 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 NASPP49321 788 aaPredicted RBP20.35■□□□□ 0.85
PKD1-227ENST00000564313 GPC3P51654 580 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 WDR5P61964 334 aaKnown RBP20.35■□□□□ 0.85
PKD1-227ENST00000564313 MRPS5P82675 430 aaKnown RBP20.35■□□□□ 0.85
PKD1-227ENST00000564313 PAK2Q13177 524 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 HYIQ5T013 277 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 FAM173BQ6P4H8 233 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 ZNF579Q8NAF0 562 aaKnown RBP20.35■□□□□ 0.85
PKD1-227ENST00000564313 PSPC1Q8WXF1 523 aaKnown RBP20.35■□□□□ 0.85
PKD1-227ENST00000564313 SCLT1Q96NL6 688 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 KIAA1024Q9UPX6 916 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 MICAL3Q7RTP6 2002 aa20.35■□□□□ 0.85
PKD1-227ENST00000564313 GPR182O15218 404 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 RPS6KA5O75582 802 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 ATP2A2P16615 1042 aaKnown RBP20.34■□□□□ 0.85
PKD1-227ENST00000564313 MKRN4PQ13434 485 aaPredicted RBP20.34■□□□□ 0.85
PKD1-227ENST00000564313 SLC39A14Q15043 492 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 MCPH1Q8NEM0 835 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 NLRP7Q8WX94 980 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 CDK5RAP3Q96JB5 506 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 USP28Q96RU2 1077 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 OSMRQ99650 979 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 INO80BQ9C086 356 aaPredicted RBP20.34■□□□□ 0.85
PKD1-227ENST00000564313 ADAMTS10Q9H324 1103 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 PRDM12Q9H4Q4 367 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 DDX19AQ9NUU7 478 aaKnown RBP20.34■□□□□ 0.85
PKD1-227ENST00000564313 DNM3Q9UQ16 869 aa20.34■□□□□ 0.85
PKD1-227ENST00000564313 SRPRBQ9Y5M8 271 aaKnown RBP20.34■□□□□ 0.85
PKD1-227ENST00000564313 NCOR1O75376 2440 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 ARHGEF35A5YM69 484 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 PP2D1A8MPX8 630 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 AMHP03971 560 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 EIF4BP23588 611 aaKnown RBP20.33■□□□□ 0.85
PKD1-227ENST00000564313 CD52P31358 61 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 UBA7P41226 1012 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 DRP2Q13474 957 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 MXD4Q14582 209 aaPredicted RBP20.33■□□□□ 0.85
PKD1-227ENST00000564313 RAB30Q15771 203 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 TCTN1Q2MV58 587 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 RHPN2Q8IUC4 686 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 CALML4Q96GE6 196 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 MMTAG2Q9BU76 263 aaKnown RBP20.33■□□□□ 0.85
PKD1-227ENST00000564313 GCOM2Q9BZD3 368 aaPredicted RBP20.33■□□□□ 0.85
PKD1-227ENST00000564313 OSBPL7Q9BZF2 842 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 AGO3Q9H9G7 860 aaKnown RBP20.33■□□□□ 0.85
PKD1-227ENST00000564313 PADI3Q9ULW8 664 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 ATP6V1DQ9Y5K8 247 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 COL4A3BPQ9Y5P4 624 aa20.33■□□□□ 0.85
PKD1-227ENST00000564313 BDP1A6H8Y1 2624 aa20.33■□□□□ 0.84
PKD1-227ENST00000564313 XIRP2A4UGR9 3374 aa20.32■□□□□ 0.84
PKD1-227ENST00000564313 YEATS4O95619 227 aa20.32■□□□□ 0.84
PKD1-227ENST00000564313 EYA4O95677 639 aa20.32■□□□□ 0.84
PKD1-227ENST00000564313 BRD1O95696 1058 aa20.32■□□□□ 0.84
PKD1-227ENST00000564313 CDC25AP30304 524 aa20.32■□□□□ 0.84
PKD1-227ENST00000564313 PBX2P40425 430 aa20.32■□□□□ 0.84
PKD1-227ENST00000564313 CEBPZQ03701 1054 aaKnown RBP20.32■□□□□ 0.84
PKD1-227ENST00000564313 STK38Q15208 465 aa20.32■□□□□ 0.84
PKD1-227ENST00000564313 CCDC85BQ15834 202 aaPredicted RBP20.32■□□□□ 0.84
PKD1-227ENST00000564313 CABP7Q86V35 215 aa20.32■□□□□ 0.84
PKD1-227ENST00000564313 PPP1R16BQ96T49 567 aa20.32■□□□□ 0.84
PKD1-227ENST00000564313 XPNPEP1Q9NQW7 623 aa20.32■□□□□ 0.84
PKD1-227ENST00000564313 USO1O60763 962 aaKnown RBP20.31■□□□□ 0.84
PKD1-227ENST00000564313 DARSP14868 501 aaKnown RBP20.31■□□□□ 0.84
PKD1-227ENST00000564313 PKP1Q13835 747 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 TFDP1Q14186 410 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 ADGRE1Q14246 886 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 ECM1Q16610 540 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 FOXD4L5Q5VV16 416 aaPredicted RBP20.31■□□□□ 0.84
PKD1-227ENST00000564313 PADI6Q6TGC4 694 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 KRI1Q8N9T8 703 aaKnown RBP20.31■□□□□ 0.84
PKD1-227ENST00000564313 TMEM40Q8WWA1 233 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 FOXD4L4Q8WXT5 416 aaPredicted RBP20.31■□□□□ 0.84
PKD1-227ENST00000564313 TMEM143Q96AN5 459 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 PBX4Q9BYU1 374 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 BHMT2Q9H2M3 363 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 CDHR5Q9HBB8 845 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 ERVK-5Q9HDB9 667 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 RNF216Q9NWF9 866 aaPredicted RBP20.31■□□□□ 0.84
PKD1-227ENST00000564313 MSRAQ9UJ68 235 aa20.31■□□□□ 0.84
PKD1-227ENST00000564313 FBXO2Q9UK22 296 aaPredicted RBP20.31■□□□□ 0.84
PKD1-227ENST00000564313 CFAP45Q9UL16 551 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms