RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 RWDD3Q9Y3V2 267 aa22.19■■□□□ 1.14
CMTM3-207ENST00000564060 ADGRA3Q8IWK6 1321 aa22.19■■□□□ 1.14
CMTM3-207ENST00000564060 LAD1O00515 517 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 DARSP14868 501 aaKnown RBP22.18■■□□□ 1.14
CMTM3-207ENST00000564060 POU3F3P20264 500 aaPredicted RBP22.18■■□□□ 1.14
CMTM3-207ENST00000564060 SARSP49591 514 aaKnown RBP22.18■■□□□ 1.14
CMTM3-207ENST00000564060 NPEPPSP55786 919 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 RILPL1Q5EBL4 403 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 SLC24A5Q71RS6 500 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 FIBCD1Q8N539 461 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 SLC17A8Q8NDX2 589 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 ADAM2Q99965 735 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 RAB34Q9BZG1 259 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 TUFT1Q9NNX1 390 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 RGS18Q9NS28 235 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 CHD7Q9P2D1 2997 aa22.18■■□□□ 1.14
CMTM3-207ENST00000564060 KIAA1671Q9BY89 1806 aa22.17■■□□□ 1.14
CMTM3-207ENST00000564060 XRCC6P12956 609 aaKnown RBP eCLIP22.17■■□□□ 1.14
CMTM3-207ENST00000564060 ZSCAN20P17040 1043 aaPredicted RBP22.17■■□□□ 1.14
CMTM3-207ENST00000564060 TECP42680 631 aa22.17■■□□□ 1.14
CMTM3-207ENST00000564060 DRP2Q13474 957 aa22.17■■□□□ 1.14
CMTM3-207ENST00000564060 HAUS3Q68CZ6 603 aa22.17■■□□□ 1.14
CMTM3-207ENST00000564060 RTN4RL1Q86UN2 441 aaPredicted RBP22.17■■□□□ 1.14
CMTM3-207ENST00000564060 RHPN2Q8IUC4 686 aa22.17■■□□□ 1.14
CMTM3-207ENST00000564060 PSPC1Q8WXF1 523 aaKnown RBP22.17■■□□□ 1.14
CMTM3-207ENST00000564060 MTUS1Q9ULD2 1270 aa22.17■■□□□ 1.14
CMTM3-207ENST00000564060 PCDHB7Q9Y5E2 793 aa22.17■■□□□ 1.14
CMTM3-207ENST00000564060 STK24Q9Y6E0 443 aa22.17■■□□□ 1.14
CMTM3-207ENST00000564060 RBAK-RBAKDNI3L0D1 243 aa22.16■■□□□ 1.14
CMTM3-207ENST00000564060 DGKIO75912 1065 aa22.16■■□□□ 1.14
CMTM3-207ENST00000564060 SFPQP23246 707 aaKnown RBP eCLIP22.16■■□□□ 1.14
CMTM3-207ENST00000564060 CUL4AQ13619 759 aa22.16■■□□□ 1.14
CMTM3-207ENST00000564060 BTG3Q14201 252 aaPredicted RBP22.16■■□□□ 1.14
CMTM3-207ENST00000564060 EMC2Q15006 297 aa22.16■■□□□ 1.14
CMTM3-207ENST00000564060 LARP1BQ659C4 914 aaKnown RBP22.16■■□□□ 1.14
CMTM3-207ENST00000564060 FBXO22Q8NEZ5 403 aa22.16■■□□□ 1.14
CMTM3-207ENST00000564060 MTRQ99707 1265 aa22.16■■□□□ 1.14
CMTM3-207ENST00000564060 RC3H2Q9HBD1 1191 aaKnown RBP22.16■■□□□ 1.14
CMTM3-207ENST00000564060 LMCD1Q9NZU5 365 aa22.16■■□□□ 1.14
CMTM3-207ENST00000564060 COL4A3BPQ9Y5P4 624 aa22.16■■□□□ 1.14
CMTM3-207ENST00000564060 EPOPA6NHQ4 379 aa22.15■■□□□ 1.14
CMTM3-207ENST00000564060 ASAP2O43150 1006 aa22.15■■□□□ 1.14
CMTM3-207ENST00000564060 DGAT1O75907 488 aa22.15■■□□□ 1.14
CMTM3-207ENST00000564060 PDCP20941 246 aa22.15■■□□□ 1.14
CMTM3-207ENST00000564060 MUTP22033 750 aa22.15■■□□□ 1.14
CMTM3-207ENST00000564060 FXR2P51116 673 aaKnown RBP eCLIP22.15■■□□□ 1.14
CMTM3-207ENST00000564060 GRB10Q13322 594 aa22.15■■□□□ 1.14
CMTM3-207ENST00000564060 CMTR2Q8IYT2 770 aaKnown RBP22.15■■□□□ 1.14
CMTM3-207ENST00000564060 ZNF689Q96CS4 500 aaPredicted RBP22.15■■□□□ 1.14
CMTM3-207ENST00000564060 NLRP4Q96MN2 994 aa22.15■■□□□ 1.14
CMTM3-207ENST00000564060 POLR3CQ9BUI4 534 aaPredicted RBP22.15■■□□□ 1.14
CMTM3-207ENST00000564060 DACT1Q9NYF0 836 aa22.15■■□□□ 1.14
CMTM3-207ENST00000564060 PRRC2BQ5JSZ5 2229 aaKnown RBP22.14■■□□□ 1.14
CMTM3-207ENST00000564060 A0A087WZ62 844 aa22.14■■□□□ 1.13
CMTM3-207ENST00000564060 C9IYK1 514 aa22.14■■□□□ 1.13
CMTM3-207ENST00000564060 RFXAPO00287 272 aa22.14■■□□□ 1.13
CMTM3-207ENST00000564060 MGEA5O60502 916 aa22.14■■□□□ 1.13
CMTM3-207ENST00000564060 RPA1P27694 616 aa22.14■■□□□ 1.13
CMTM3-207ENST00000564060 TOB1P50616 345 aaPredicted RBP22.14■■□□□ 1.13
CMTM3-207ENST00000564060 CRIPAKQ8N1N5 446 aa22.14■■□□□ 1.13
CMTM3-207ENST00000564060 ZNF668Q96K58 619 aaPredicted RBP22.14■■□□□ 1.13
CMTM3-207ENST00000564060 FDXACB1Q9BRP7 624 aaPredicted RBP22.14■■□□□ 1.13
CMTM3-207ENST00000564060 C17orf80Q9BSJ5 609 aa22.14■■□□□ 1.13
CMTM3-207ENST00000564060 ELAC1Q9H777 363 aaKnown RBP22.14■■□□□ 1.13
CMTM3-207ENST00000564060 ATP6V0A4Q9HBG4 840 aa22.14■■□□□ 1.13
CMTM3-207ENST00000564060 PCDHB6Q9Y5E3 794 aa22.14■■□□□ 1.13
CMTM3-207ENST00000564060 MTCH2Q9Y6C9 303 aa22.14■■□□□ 1.13
CMTM3-207ENST00000564060 PRPHP41219 470 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 RARRES1P49788 294 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 PTGDRQ13258 359 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 PDIA5Q14554 519 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 DSC3Q14574 896 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 MXD4Q14582 209 aaPredicted RBP22.13■■□□□ 1.13
CMTM3-207ENST00000564060 NBR1Q14596 966 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 EPC2Q52LR7 807 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 SPRED2Q7Z698 418 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 CATSPER3Q86XQ3 398 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.13■■□□□ 1.13
CMTM3-207ENST00000564060 TMEM192Q8IY95 271 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 ZNF579Q8NAF0 562 aaKnown RBP22.13■■□□□ 1.13
CMTM3-207ENST00000564060 GDPD5Q8WTR4 605 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 NACC1Q96RE7 527 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 CHST12Q9NRB3 414 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 TMEM161AQ9NX61 479 aa22.13■■□□□ 1.13
CMTM3-207ENST00000564060 TRANK1O15050 2925 aa22.12■■□□□ 1.13
CMTM3-207ENST00000564060 HOXA2O43364 376 aa22.12■■□□□ 1.13
CMTM3-207ENST00000564060 RB1P06400 928 aa22.12■■□□□ 1.13
CMTM3-207ENST00000564060 SPATA31C1P0DKV0 1188 aa22.12■■□□□ 1.13
CMTM3-207ENST00000564060 MICALL1Q8N3F8 863 aa22.12■■□□□ 1.13
CMTM3-207ENST00000564060 C4orf32Q8N8J7 132 aa22.12■■□□□ 1.13
CMTM3-207ENST00000564060 PPM1EQ8WY54 764 aa22.12■■□□□ 1.13
CMTM3-207ENST00000564060 TMEM143Q96AN5 459 aa22.12■■□□□ 1.13
CMTM3-207ENST00000564060 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.12■■□□□ 1.13
CMTM3-207ENST00000564060 BMP2KQ9NSY1 1161 aaPredicted RBP22.12■■□□□ 1.13
CMTM3-207ENST00000564060 LRWD1Q9UFC0 647 aa22.12■■□□□ 1.13
CMTM3-207ENST00000564060 DBR1Q9UK59 544 aaKnown RBP22.12■■□□□ 1.13
CMTM3-207ENST00000564060 ZBTB39O15060 712 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 LPXNO60711 386 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 MED24O75448 989 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 IBSPP21815 317 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms