RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 MAPK4P31152 587 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 PSMC4P43686 418 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 GJA8P48165 433 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 ADCY7P51828 1080 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 RPS6P62753 249 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 GUCY1B3Q02153 619 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 SP3Q02447 781 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 TRAF1Q13077 416 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 ORC1Q13415 861 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 BAATQ14032 418 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 TCEAL1Q15170 157 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 UBE2SQ16763 222 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 KRT40Q6A162 431 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 ELMSAN1Q6PJG2 1045 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 USP17L6PQ6QN14 398 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 NSMFQ6X4W1 530 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 C8orf86Q6ZUL3 223 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 GPR142Q7Z601 462 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 MCF2L2Q86YR7 1114 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 ABRAQ8N0Z2 381 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 BEND7Q8N7W2 519 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 FAM184AQ8NB25 1140 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 DAGLBQ8NCG7 672 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 CCDC148Q8NFR7 591 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 FBXO18Q8NFZ0 1043 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 CD99L2Q8TCZ2 262 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 RASGRP4Q8TDF6 673 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 NUDT8Q8WV74 236 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 USP6NLQ92738 828 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 C8orf76Q96K31 380 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 PSTPIP2Q9H939 334 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 RIC8AQ9NPQ8 531 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 RNF19AQ9NV58 838 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 TMEM260Q9NX78 707 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 CYP39A1Q9NYL5 469 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 FBXO40Q9UH90 709 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 GJD2Q9UKL4 321 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 PCDHA4Q9UN74 947 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 INPP5FQ9Y2H2 1132 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 AK5Q9Y6K8 562 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 FRMPD4Q14CM0 1322 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 CENPFP49454 3210 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 SLC15A5A6NIM6 579 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 KIF28PB7ZC32 967 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 GCOM1H8Y6P7 765 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 EIF1AYO14602 144 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 EDIL3O43854 480 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 LILRB5O75023 590 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 FKTNO75072 461 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 CPNE3O75131 537 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 CFBP00751 764 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 MMP1P03956 469 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 HOXC6P09630 235 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 POLR2MP0CAP2 368 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 FCER1AP12319 257 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 SYT1P21579 422 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 CALML3P27482 149 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 ADORA2AP29274 412 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 HOXA13P31271 388 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 AFF1P51825 1210 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 NLRP5P59047 1200 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 IGBP1P78318 339 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 CNTN2Q02246 1040 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 ZNF792Q3KQV3 632 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 EARS2Q5JPH6 523 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 WDR78Q5VTH9 848 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 LARP1BQ659C4 914 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 RNF207Q6ZRF8 634 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 JAZF1Q86VZ6 243 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 TEX2Q8IWB9 1127 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 DIS3L2Q8IYB7 885 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 BLIDQ8IZY5 108 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 SAMD3Q8N6K7 520 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 FAM133AQ8N9E0 248 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 IL31RAQ8NI17 732 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 NPLOC4Q8TAT6 608 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 CCDC12Q8WUD4 166 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 CUL5Q93034 780 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 PLD4Q96BZ4 506 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 SCARF2Q96GP6 870 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 PGBD1Q96JS3 809 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 MMP19Q99542 508 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 MAF1Q9H063 256 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 SMG9Q9H0W8 520 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 RBSNQ9H1K0 784 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 DNAJC25Q9H1X3 360 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 TMX1Q9H3N1 280 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 SRA1Q9HD15 236 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 C6orf50Q9HD87 102 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 JPH1Q9HDC5 661 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 GABRQQ9UN88 632 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 MTMR6Q9Y217 621 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 KIF3AQ9Y496 699 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 DDX49Q9Y6V7 483 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 PFASO15067 1338 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 RPTORQ8N122 1335 aa5.93□□□□□ -1.46
HERPUD1-207ENST00000563781 COL11A1P12107 1806 aaPredicted RBP5.92□□□□□ -1.46
HERPUD1-207ENST00000563781 hCG_2014768A0A024R1R8 64 aa5.92□□□□□ -1.46
HERPUD1-207ENST00000563781 BTBD18B2RXH4 712 aa5.92□□□□□ -1.46
HERPUD1-207ENST00000563781 ENPP3O14638 875 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms