RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 SUCLA2Q9P2R7 463 aaPredicted RBP21.29■■□□□ 1
TRADD-203ENST00000563348 UNC80Q8N2C7 3258 aa21.28■■□□□ 1
TRADD-203ENST00000563348 DENND3A2RUS2 1198 aa21.28■■□□□ 1
TRADD-203ENST00000563348 LYPLA2O95372 231 aa21.28■■□□□ 1
TRADD-203ENST00000563348 FAM189BP81408 668 aa21.28■■□□□ 1
TRADD-203ENST00000563348 DSC3Q14574 896 aa21.28■■□□□ 1
TRADD-203ENST00000563348 SLC24A5Q71RS6 500 aa21.28■■□□□ 1
TRADD-203ENST00000563348 TMEM192Q8IY95 271 aa21.28■■□□□ 1
TRADD-203ENST00000563348 FBXO22Q8NEZ5 403 aa21.28■■□□□ 1
TRADD-203ENST00000563348 GDPD5Q8WTR4 605 aa21.28■■□□□ 1
TRADD-203ENST00000563348 NLRP7Q8WX94 980 aa21.28■■□□□ 1
TRADD-203ENST00000563348 BACH2Q9BYV9 841 aa21.28■■□□□ 1
TRADD-203ENST00000563348 DHX33Q9H6R0 707 aaKnown RBP21.28■■□□□ 1
TRADD-203ENST00000563348 TTC28Q96AY4 2481 aa21.28■■□□□ 1
TRADD-203ENST00000563348 C9IYK1 514 aa21.27■■□□□ 1
TRADD-203ENST00000563348 ZBTB39O15060 712 aa21.27■■□□□ 1
TRADD-203ENST00000563348 RFC5P40937 340 aa21.27■■□□□ 1
TRADD-203ENST00000563348 BTG3Q14201 252 aaPredicted RBP21.27■■□□□ 1
TRADD-203ENST00000563348 TTC38Q5R3I4 469 aa21.27■■□□□ 1
TRADD-203ENST00000563348 MICALL1Q8N3F8 863 aa21.27■■□□□ 1
TRADD-203ENST00000563348 NEK9Q8TD19 979 aa21.27■■□□□ 1
TRADD-203ENST00000563348 SLC7A3Q8WY07 619 aa21.27■■□□□ 1
TRADD-203ENST00000563348 SCLT1Q96NL6 688 aa21.27■■□□□ 1
TRADD-203ENST00000563348 GCOM2Q9BZD3 368 aaPredicted RBP21.27■■□□□ 1
TRADD-203ENST00000563348 PRDM6Q9NQX0 595 aa21.27■■□□□ 1
TRADD-203ENST00000563348 RNF216Q9NWF9 866 aaPredicted RBP21.27■■□□□ 1
TRADD-203ENST00000563348 LRFN2Q9ULH4 789 aa21.27■■□□□ 1
TRADD-203ENST00000563348 NOL7Q9UMY1 257 aaKnown RBP21.27■■□□□ 1
TRADD-203ENST00000563348 PCDHB7Q9Y5E2 793 aa21.27■■□□□ 1
TRADD-203ENST00000563348 ADGRA3Q8IWK6 1321 aa21.27■□□□□ 0.99
TRADD-203ENST00000563348 COL4A6Q14031 1691 aa21.26■□□□□ 0.99
TRADD-203ENST00000563348 LINC00271P0C7V0 271 aa21.26■□□□□ 0.99
TRADD-203ENST00000563348 XKR9Q5GH70 373 aa21.26■□□□□ 0.99
TRADD-203ENST00000563348 ZNF410Q86VK4 478 aa21.26■□□□□ 0.99
TRADD-203ENST00000563348 RHPN2Q8IUC4 686 aa21.26■□□□□ 0.99
TRADD-203ENST00000563348 CLP1Q92989 425 aaKnown RBP21.26■□□□□ 0.99
TRADD-203ENST00000563348 SPTBN5Q9NRC6 3674 aaKnown RBP21.25■□□□□ 0.99
TRADD-203ENST00000563348 A0A087WZ62 844 aa21.25■□□□□ 0.99
TRADD-203ENST00000563348 H3BNC9 293 aa21.25■□□□□ 0.99
TRADD-203ENST00000563348 RB1P06400 928 aa21.25■□□□□ 0.99
TRADD-203ENST00000563348 OR52Z1P0C646 297 aa21.25■□□□□ 0.99
TRADD-203ENST00000563348 ZSCAN20P17040 1043 aaPredicted RBP21.25■□□□□ 0.99
TRADD-203ENST00000563348 BMPR1AP36894 532 aa21.25■□□□□ 0.99
TRADD-203ENST00000563348 POLGP54098 1239 aaPredicted RBP21.25■□□□□ 0.99
TRADD-203ENST00000563348 CMTR2Q8IYT2 770 aaKnown RBP21.25■□□□□ 0.99
TRADD-203ENST00000563348 C4orf32Q8N8J7 132 aa21.25■□□□□ 0.99
TRADD-203ENST00000563348 FDXACB1Q9BRP7 624 aaPredicted RBP21.25■□□□□ 0.99
TRADD-203ENST00000563348 ANKEF1Q9NU02 776 aa21.25■□□□□ 0.99
TRADD-203ENST00000563348 RWDD3Q9Y3V2 267 aa21.25■□□□□ 0.99
TRADD-203ENST00000563348 POTEMA6NI47 508 aa21.24■□□□□ 0.99
TRADD-203ENST00000563348 XRCC6P12956 609 aaKnown RBP eCLIP21.24■□□□□ 0.99
TRADD-203ENST00000563348 GJB2P29033 226 aa21.24■□□□□ 0.99
TRADD-203ENST00000563348 TECP42680 631 aa21.24■□□□□ 0.99
TRADD-203ENST00000563348 TOB1P50616 345 aaPredicted RBP21.24■□□□□ 0.99
TRADD-203ENST00000563348 GPM6BQ13491 265 aa21.24■□□□□ 0.99
TRADD-203ENST00000563348 KSR1Q8IVT5 923 aa21.24■□□□□ 0.99
TRADD-203ENST00000563348 TMEM143Q96AN5 459 aa21.24■□□□□ 0.99
TRADD-203ENST00000563348 INO80BQ9C086 356 aaPredicted RBP21.24■□□□□ 0.99
TRADD-203ENST00000563348 ELAC1Q9H777 363 aaKnown RBP21.24■□□□□ 0.99
TRADD-203ENST00000563348 MYO7AQ13402 2215 aa21.24■□□□□ 0.99
TRADD-203ENST00000563348 C5orf67F2Z3F1 127 aa21.23■□□□□ 0.99
TRADD-203ENST00000563348 GAS2O43903 313 aaKnown RBP21.23■□□□□ 0.99
TRADD-203ENST00000563348 CSDE1O75534 798 aaKnown RBP21.23■□□□□ 0.99
TRADD-203ENST00000563348 SPATA31C1P0DKV0 1188 aa21.23■□□□□ 0.99
TRADD-203ENST00000563348 IBSPP21815 317 aaPredicted RBP21.23■□□□□ 0.99
TRADD-203ENST00000563348 FGFR4P22455 802 aa21.23■□□□□ 0.99
TRADD-203ENST00000563348 PRPF31Q8WWY3 499 aaKnown RBP21.23■□□□□ 0.99
TRADD-203ENST00000563348 PSPC1Q8WXF1 523 aaKnown RBP21.23■□□□□ 0.99
TRADD-203ENST00000563348 CHST12Q9NRB3 414 aa21.23■□□□□ 0.99
TRADD-203ENST00000563348 TMEM161AQ9NX61 479 aa21.23■□□□□ 0.99
TRADD-203ENST00000563348 SMC3Q9UQE7 1217 aa21.23■□□□□ 0.99
TRADD-203ENST00000563348 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.23■□□□□ 0.99
TRADD-203ENST00000563348 COL4A3BPQ9Y5P4 624 aa21.23■□□□□ 0.99
TRADD-203ENST00000563348 BRWD1Q9NSI6 2320 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 ASAP2O43150 1006 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 CTNNB1P35222 781 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 GATMP50440 423 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 NBR1Q14596 966 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 EMC2Q15006 297 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 FAM102BQ5T8I3 360 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 CATSPER3Q86XQ3 398 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 ATXN2LQ8WWM7 1075 aaKnown RBP21.22■□□□□ 0.99
TRADD-203ENST00000563348 TCP11Q8WWU5 503 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 NLRP4Q96MN2 994 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 POLR3CQ9BUI4 534 aaPredicted RBP21.22■□□□□ 0.99
TRADD-203ENST00000563348 ATP6V0A4Q9HBG4 840 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 TUFT1Q9NNX1 390 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 THEGQ9P2T0 379 aa21.22■□□□□ 0.99
TRADD-203ENST00000563348 MRPL42Q9Y6G3 142 aaKnown RBP21.22■□□□□ 0.99
TRADD-203ENST00000563348 SFPQP23246 707 aaKnown RBP eCLIP21.21■□□□□ 0.99
TRADD-203ENST00000563348 LAMTOR4Q0VGL1 99 aa21.21■□□□□ 0.99
TRADD-203ENST00000563348 SKIV2LQ15477 1246 aaKnown RBP21.21■□□□□ 0.99
TRADD-203ENST00000563348 PTPROQ16827 1216 aa21.21■□□□□ 0.99
TRADD-203ENST00000563348 PAN2Q504Q3 1202 aaKnown RBP21.21■□□□□ 0.99
TRADD-203ENST00000563348 MCTP1Q6DN14 999 aa21.21■□□□□ 0.99
TRADD-203ENST00000563348 PIGOQ8TEQ8 1089 aa21.21■□□□□ 0.99
TRADD-203ENST00000563348 MRPL38Q96DV4 380 aaKnown RBP21.21■□□□□ 0.99
TRADD-203ENST00000563348 MTRQ99707 1265 aa21.21■□□□□ 0.99
TRADD-203ENST00000563348 PLVAPQ9BX97 442 aa21.21■□□□□ 0.99
TRADD-203ENST00000563348 IFT122Q9HBG6 1241 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms