RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 SLC16A4O15374 487 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 AFPP02771 609 aaKnown RBP10.31□□□□□ -0.76
LINC00838-201ENST00000562956 ARHGAP25P42331 645 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 MKRN3Q13064 507 aaKnown RBP10.31□□□□□ -0.76
LINC00838-201ENST00000562956 TCERG1LQ5VWI1 586 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 HAUS6Q7Z4H7 955 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 FAM186BQ8IYM0 893 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 METTL14Q9HCE5 456 aaKnown RBP10.31□□□□□ -0.76
LINC00838-201ENST00000562956 NLRC4Q9NPP4 1024 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
LINC00838-201ENST00000562956 SOCS7O14512 581 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 ATG7O95352 703 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 ATP4AP20648 1035 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 PSMC2P35998 433 aaKnown RBP10.31□□□□□ -0.76
LINC00838-201ENST00000562956 CDK17Q00537 523 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 PDXDC1Q6P996 788 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 CACNA2D4Q7Z3S7 1137 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 BSNDQ8WZ55 320 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 KIFC3Q9BVG8 833 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 CEP72Q9P209 647 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 ARHGAP20Q9P2F6 1191 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 TFR2Q9UP52 801 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 IGSF9BQ9UPX0 1349 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 CTIFO43310 598 aaKnown RBP10.3□□□□□ -0.76
LINC00838-201ENST00000562956 DKC1O60832 514 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC00838-201ENST00000562956 FARP2O94887 1054 aaPredicted RBP10.3□□□□□ -0.76
LINC00838-201ENST00000562956 ACTN1P12814 892 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 SLC9A1P19634 815 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 NCKAP1LP55160 1127 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 POLR2FP61218 127 aaKnown RBP10.3□□□□□ -0.76
LINC00838-201ENST00000562956 ERVK-9P63128 1117 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 GTF2BQ00403 316 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 PPP2R3AQ06190 1150 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 WDR78Q5VTH9 848 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 DPY19L2P1Q6NXN4 242 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 ACCSQ96QU6 501 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 MMP19Q99542 508 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 PDLIM7Q9NR12 457 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 CYP26B1Q9NR63 512 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC00838-201ENST00000562956 MAFBQ9Y5Q3 323 aaPredicted RBP10.3□□□□□ -0.76
LINC00838-201ENST00000562956 V9GYY5 206 aaPredicted RBP10.3□□□□□ -0.76
LINC00838-201ENST00000562956 DNAJC25-GNG10A0A024R161 153 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 NPTX2P47972 431 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 ALCAMQ13740 583 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 KCTD2Q14681 263 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 LY6KQ17RY6 165 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 ARHGAP29Q52LW3 1261 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC00838-201ENST00000562956 CCDC170Q8IYT3 715 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 GOLGA5Q8TBA6 731 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 MS4A4AQ96JQ5 239 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 EDEM3Q9BZQ6 932 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 PORCNQ9H237 461 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 GANQ9H2C0 597 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 ST6GALNAC4Q9H4F1 302 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 TMEM206Q9H813 350 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 L2HGDHQ9H9P8 463 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 ZNF302Q9NR11 478 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 TRIM10Q9UDY6 481 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 FRMD4BQ9Y2L6 1034 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 CCDC169A6NNP5 214 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 CASQ1P31415 396 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 COPB2P35606 906 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 SLC9A9Q8IVB4 645 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 RDH13Q8NBN7 331 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 TMEM161BQ8NDZ6 487 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 CBWD1Q9BRT8 395 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 MKNK1Q9BUB5 465 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 PCIF1Q9H4Z3 704 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 EFCC1Q9HA90 598 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 XPNPEP1Q9NQW7 623 aa10.3□□□□□ -0.76
LINC00838-201ENST00000562956 KIAA1217Q5T5P2 1943 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 GSTTP1A0A1W2PQM5 241 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 EIF3CLB5ME19 914 aaKnown RBP10.29□□□□□ -0.76
LINC00838-201ENST00000562956 PDHXO00330 501 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 ZNF263O14978 683 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 TLR2O60603 784 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 EXOC3O60645 756 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 DGAT1O75907 488 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 ARIH2O95376 493 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 PON1P27169 355 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 CYLC1P35663 651 aaPredicted RBP10.29□□□□□ -0.76
LINC00838-201ENST00000562956 CYP27A1Q02318 531 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 DMP1Q13316 513 aaPredicted RBP10.29□□□□□ -0.76
LINC00838-201ENST00000562956 EXOC3L4Q17RC7 722 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 MTERF2Q49AM1 385 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 XKR3Q5GH77 459 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 CCDC42Q96M95 316 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 PCYT2Q99447 389 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 EIF3CQ99613 913 aaKnown RBP10.29□□□□□ -0.76
LINC00838-201ENST00000562956 MROH8Q9H579 483 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 RRAGCQ9HB90 399 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 ZNF215Q9UL58 517 aaPredicted RBP10.29□□□□□ -0.76
LINC00838-201ENST00000562956 LOXHD1Q8IVV2 1947 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 IGKV6D-21A0A0A0MT36 114 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 RCCD1A6NED2 376 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 BTBD19C9JJ37 291 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 KIF5CO60282 957 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 EIF4A3P38919 411 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms