RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 GK5Q6ZS86 529 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 STK11IPQ8N1F8 1099 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 CEP112Q8N8E3 955 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 IQUBQ8NA54 791 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 ZNF507Q8TCN5 953 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 DHX58Q96C10 678 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 CRNKL1Q9BZJ0 848 aaKnown RBP8.95□□□□□ -0.98
KARS-203ENST00000562875 GBP3Q9H0R5 595 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 SEMA6CQ9H3T2 930 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 ABCF2Q9UG63 623 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.95□□□□□ -0.98
KARS-203ENST00000562875 KCNJ14Q9UNX9 436 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 THRAP3Q9Y2W1 955 aaKnown RBP8.95□□□□□ -0.98
KARS-203ENST00000562875 PCDHB14Q9Y5E9 798 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 V9GYY5 206 aaPredicted RBP8.95□□□□□ -0.98
KARS-203ENST00000562875 ITIH6Q6UXX5 1313 aa8.95□□□□□ -0.98
KARS-203ENST00000562875 EIF3JO75822 258 aaKnown RBP8.94□□□□□ -0.98
KARS-203ENST00000562875 NFICP08651 508 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 H2AFXP16104 143 aaPredicted RBP8.94□□□□□ -0.98
KARS-203ENST00000562875 PPP1R2P41236 205 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 GNAQP50148 359 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 EIF5P55010 431 aaKnown RBP8.94□□□□□ -0.98
KARS-203ENST00000562875 TBX2Q13207 712 aaPredicted RBP8.94□□□□□ -0.98
KARS-203ENST00000562875 DOC2BQ14184 412 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 ERCC6LQ2NKX8 1250 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 SUSD4Q5VX71 490 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 SPTY2D1Q68D10 685 aaPredicted RBP8.94□□□□□ -0.98
KARS-203ENST00000562875 GPAT2Q6NUI2 795 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 BEND4Q6ZU67 534 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 UBE3DQ7Z6J8 389 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 FAM177A1Q8N128 213 aaPredicted RBP8.94□□□□□ -0.98
KARS-203ENST00000562875 MIGA1Q8NAN2 632 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 CCDC12Q8WUD4 166 aaPredicted RBP8.94□□□□□ -0.98
KARS-203ENST00000562875 EZH1Q92800 747 aaPredicted RBP8.94□□□□□ -0.98
KARS-203ENST00000562875 PHF20Q9BVI0 1012 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 NYXQ9GZU5 481 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 CSRNP2Q9H175 543 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 ARPP21Q9UBL0 812 aaPredicted RBP8.94□□□□□ -0.98
KARS-203ENST00000562875 PCOLCE2Q9UKZ9 415 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 NIP7Q9Y221 180 aaKnown RBP eCLIP8.94□□□□□ -0.98
KARS-203ENST00000562875 PCDHB6Q9Y5E3 794 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 PDS5AQ29RF7 1337 aaKnown RBP8.94□□□□□ -0.98
KARS-203ENST00000562875 SBF2Q86WG5 1849 aa8.94□□□□□ -0.98
KARS-203ENST00000562875 FAM95CA0A1B0GW59 222 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 MSTNO14793 375 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 HTR3BO95264 441 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 MYL1P05976 194 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 ZNF18P17022 549 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 MCM3P25205 808 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 NLRP5P59047 1200 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 CLCQ05315 142 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 COL9A2Q14055 689 aaPredicted RBP8.93□□□□□ -0.98
KARS-203ENST00000562875 MAP7Q14244 749 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 DDB1Q16531 1140 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 TMTC1Q8IUR5 882 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.93□□□□□ -0.98
KARS-203ENST00000562875 REXO1L1PQ8IX06 675 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 REXO1Q8N1G1 1221 aaKnown RBP8.93□□□□□ -0.98
KARS-203ENST00000562875 SYNE4Q8N205 404 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 IGSF22Q8N9C0 903 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 SLC43A3Q8NBI5 491 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 KCT2Q8NC54 265 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 CCDC148Q8NFR7 591 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 RASSF8Q8NHQ8 419 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 DPF2Q92785 391 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 SPOCK3Q9BQ16 436 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 CARD6Q9BX69 1037 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 ANKRD2Q9GZV1 360 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 FBRSQ9HAH7 460 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 ARFGAP3Q9NP61 516 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 CALCOCO1Q9P1Z2 691 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 MYO1AQ9UBC5 1043 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 MAGEC2Q9UBF1 373 aaPredicted RBP8.93□□□□□ -0.98
KARS-203ENST00000562875 REV1Q9UBZ9 1251 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 PRDM4Q9UKN5 801 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 RAXQ9Y2V3 346 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 TAF1P21675 1872 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 CDK5RAP2Q96SN8 1893 aa8.93□□□□□ -0.98
KARS-203ENST00000562875 MYH14Q7Z406 1995 aaKnown RBP8.93□□□□□ -0.98
KARS-203ENST00000562875 BCL9LQ86UU0 1499 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 ZNF804BA4D1E1 1349 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 TMEM232C9JQI7 657 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 NPHP1O15259 732 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 PRKAB2O43741 272 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 PROCP04070 461 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 ATF4P18848 351 aaPredicted RBP8.92□□□□□ -0.98
KARS-203ENST00000562875 HOXA7P31268 230 aaPredicted RBP8.92□□□□□ -0.98
KARS-203ENST00000562875 DNAJA1P31689 397 aaKnown RBP8.92□□□□□ -0.98
KARS-203ENST00000562875 LONP1P36776 959 aaKnown RBP8.92□□□□□ -0.98
KARS-203ENST00000562875 AFMP43652 599 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 CRKLP46109 303 aaKnown RBP8.92□□□□□ -0.98
KARS-203ENST00000562875 SOX9P48436 509 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 TOB1P50616 345 aaPredicted RBP8.92□□□□□ -0.98
KARS-203ENST00000562875 ARID5AQ03989 594 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 NR1I3Q14994 352 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 BRD3Q15059 726 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 SEC23AQ15436 765 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 SPECC1Q5M775 1068 aa8.92□□□□□ -0.98
KARS-203ENST00000562875 ARL6IP4Q66PJ3 421 aaKnown RBP8.92□□□□□ -0.98
KARS-203ENST00000562875 GALNT17Q6IS24 598 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms