RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 POTEMA6NI47 508 aa10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 P4HBP07237 508 aaKnown RBP10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 STAG3L1P0CL83 205 aa10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 SRGAP2CP0DJJ0 459 aa10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 SARSP49591 514 aaKnown RBP10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 POLGP54098 1239 aaPredicted RBP10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 SPIRE1Q08AE8 756 aa10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 RABEP1Q15276 862 aa10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 TJAP1Q5JTD0 557 aa10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 MAEAQ7L5Y9 396 aa10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 ZNF689Q96CS4 500 aaPredicted RBP10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 NAP1L4Q99733 375 aaKnown RBP10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 EIF2AK1Q9BQI3 630 aaKnown RBP10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 TTC12Q9H892 705 aaPredicted RBP10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 RC3H2Q9HBD1 1191 aaKnown RBP10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 PCDHA12Q9UN75 941 aa10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 PCDHGC5Q9Y5F6 944 aa10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 SQORQ9Y6N5 450 aa10.61□□□□□ -0.71
NSMCE1-203ENST00000562039 COL4A6Q14031 1691 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 C9IYK1 514 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 H3BNC9 293 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 TBX3O15119 743 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 MAFO75444 373 aaPredicted RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 SLITRK3O94933 977 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 LINC00271P0C7V0 271 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 DARSP14868 501 aaKnown RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 ZSCAN20P17040 1043 aaPredicted RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 POU3F3P20264 500 aaPredicted RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 EIF4BP23588 611 aaKnown RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 YWHABP31946 246 aaKnown RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 BMPR1AP36894 532 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 MRPS5P82675 430 aaKnown RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 DSC3Q14574 896 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 TCEAL5Q5H9L2 206 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 TTC38Q5R3I4 469 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 MCTP1Q6DN14 999 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 SLFN12Q8IYM2 578 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 PIGOQ8TEQ8 1089 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 ASB2Q96Q27 587 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 LLPHQ9BRT6 129 aaKnown RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 GCOM2Q9BZD3 368 aaPredicted RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 IGFLR1Q9H665 355 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 UPF2Q9HAU5 1272 aaKnown RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 ATP6V0A4Q9HBG4 840 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 SH2B1Q9NRF2 756 aaPredicted RBP10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 RGS18Q9NS28 235 aa10.6□□□□□ -0.71
NSMCE1-203ENST00000562039 KIAA1671Q9BY89 1806 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 ST18O60284 1047 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 KCNA5P22460 613 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 DNAJB1P25685 340 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 GTF2F1P35269 517 aaKnown RBP eCLIP10.59□□□□□ -0.715e-6■■■■□ 22
NSMCE1-203ENST00000562039 PBX3P40426 434 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 TECP42680 631 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 DNM2P50570 870 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 HMGN5P82970 282 aaKnown RBP10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 EMC2Q15006 297 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 ODR4Q5SWX8 454 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 SLC24A5Q71RS6 500 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 CMTR2Q8IYT2 770 aaKnown RBP10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 CRIPAKQ8N1N5 446 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 KLHL23Q8NBE8 558 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 FBXO18Q8NFZ0 1043 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 ADAMTS19Q8TE59 1207 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 ATXN2LQ8WWM7 1075 aaKnown RBP10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 PRPF31Q8WWY3 499 aaKnown RBP10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 LPPQ93052 612 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 HLA-CQ95604 372 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 MRPL38Q96DV4 380 aaKnown RBP10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 SAMD11Q96NU1 681 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 MTMR9Q96QG7 549 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 ZSWIM4Q9H7M6 989 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 POLD4Q9HCU8 107 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 C1orf112Q9NSG2 853 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 TYW1Q9NV66 732 aaKnown RBP10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 VCANP13611 3396 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 REV3LO60673 3130 aa10.59□□□□□ -0.71
NSMCE1-203ENST00000562039 TTC28Q96AY4 2481 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 IGKV6-21A0A0C4DH24 114 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 H3BQ06 376 aaPredicted RBP10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 DKC1O60832 514 aaKnown RBP eCLIP10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 MED24O75448 989 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 ITGB1P05556 798 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 OR52Z1P0C646 297 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 GJB2P29033 226 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 IRS1P35568 1242 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 CLUL1Q15846 466 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 PTPROQ16827 1216 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 OTUD6AQ7L8S5 288 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 CATSPER4Q7RTX7 472 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 ECHDC2Q86YB7 292 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 C4orf19Q8IY42 314 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 HELQQ8TDG4 1101 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 SLC7A3Q8WY07 619 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 CCDC43Q96MW1 224 aaKnown RBP10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 MINDY3Q9H8M7 445 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 XPNPEP1Q9NQW7 623 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 RNF19AQ9NV58 838 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 PIN4Q9Y237 131 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms