RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 PSMA7O14818 248 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 CBFA2T2O43439 604 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 GPR37L1O60883 481 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 ATP9AO75110 1047 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 EIF3JO75822 258 aaKnown RBP8.33□□□□□ -1.08
TPM1-231ENST00000561395 LYPLA2O95372 231 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 CCNE2O96020 404 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 PTMAP06454 111 aaKnown RBP8.33□□□□□ -1.08
TPM1-231ENST00000561395 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
TPM1-231ENST00000561395 IDEP14735 1019 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 SFNP31947 248 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 ICAM3P32942 547 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 GIT2Q14161 759 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 KCTD2Q14681 263 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 TPD52L1Q16890 204 aaPredicted RBP8.33□□□□□ -1.08
TPM1-231ENST00000561395 OLFML2BQ68BL8 750 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 TTI2Q6NXR4 508 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 GUF1Q8N442 669 aaKnown RBP8.33□□□□□ -1.08
TPM1-231ENST00000561395 BANK1Q8NDB2 785 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 PIGOQ8TEQ8 1089 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 HPS3Q969F9 1004 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 FGD4Q96M96 766 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 NACC1Q96RE7 527 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 REEP2Q9BRK0 252 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 RUSC1Q9BVN2 902 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 XPO4Q9C0E2 1151 aaKnown RBP8.33□□□□□ -1.08
TPM1-231ENST00000561395 BHMT2Q9H2M3 363 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 SLC39A2Q9NP94 309 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 SAMSN1Q9NSI8 373 aaKnown RBP8.33□□□□□ -1.08
TPM1-231ENST00000561395 TMEM39AQ9NV64 488 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 PANK4Q9NVE7 773 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 WDR70Q9NW82 654 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 PHF24Q9UPV7 400 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 MAPK8IP1Q9UQF2 711 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 PCDHA2Q9Y5H9 948 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 ZNF318Q5VUA4 2279 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 MYH11P35749 1972 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 PTPRSQ13332 1948 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 LOC102724159A0A0B4J2E5 919 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 A0A1W2PQ45 241 aaPredicted RBP8.32□□□□□ -1.08
TPM1-231ENST00000561395 A0A1W2PQY0 241 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 BICDL2A1A5D9 508 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 TRIM49BA6NDI0 452 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 B4DLN1 442 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 COBLO75128 1261 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 SERPINC1P01008 464 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 KRT18P05783 430 aaKnown RBP8.32□□□□□ -1.08
TPM1-231ENST00000561395 PGK2P07205 417 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 CCNE1P24864 410 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 ADORA2AP29274 412 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 QARSP47897 775 aaKnown RBP8.32□□□□□ -1.08
TPM1-231ENST00000561395 PMS1P54277 932 aaKnown RBP8.32□□□□□ -1.08
TPM1-231ENST00000561395 UBASH3AP57075 661 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 RAD51AP2Q09MP3 1159 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 FAAP100Q0VG06 881 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 PWP2Q15269 919 aaKnown RBP8.32□□□□□ -1.08
TPM1-231ENST00000561395 RAB30Q15771 203 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 UGCGQ16739 394 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 HSP90AA4PQ58FG1 418 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 FAM26FQ5R3K3 315 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 TMEM240Q5SV17 173 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 RASIP1Q5U651 963 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 RINT1Q6NUQ1 792 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 DPP9Q86TI2 863 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 DRC7Q8IY82 874 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 SMAP1Q8IYB5 467 aaPredicted RBP8.32□□□□□ -1.08
TPM1-231ENST00000561395 SPC24Q8NBT2 197 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 KHSRPQ92945 711 aaKnown RBP eCLIP8.32□□□□□ -1.08
TPM1-231ENST00000561395 P2RX5Q93086 422 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 MPHOSPH6Q99547 160 aaKnown RBP8.32□□□□□ -1.08
TPM1-231ENST00000561395 NKX2-4Q9H2Z4 354 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 ZSWIM4Q9H7M6 989 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 JPH1Q9HDC5 661 aaPredicted RBP8.32□□□□□ -1.08
TPM1-231ENST00000561395 INTS13Q9NVM9 706 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 KCND2Q9NZV8 630 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 MSRAQ9UJ68 235 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 DBR1Q9UK59 544 aaKnown RBP8.32□□□□□ -1.08
TPM1-231ENST00000561395 SAMM50Q9Y512 469 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 CACNA1AO00555 2505 aa8.32□□□□□ -1.08
TPM1-231ENST00000561395 ARHGEF35A5YM69 484 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 ZBTB39O15060 712 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 TBCAO75347 108 aaKnown RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 PPP1R37O75864 691 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 TIMP1P01033 207 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 TPM3P06753 285 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 CDK11BP21127 795 aaKnown RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 UBA1P22314 1058 aaKnown RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 GUCY2CP25092 1073 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 SP2Q02086 613 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 SPAG1Q07617 926 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 PPIGQ13427 754 aaKnown RBP eCLIP8.31□□□□□ -1.082e-10■■□□□ 11.9
TPM1-231ENST00000561395 SKIV2LQ15477 1246 aaKnown RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 HERC4Q5GLZ8 1057 aaPredicted RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 PRAMEF19Q5SWL8 479 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 CENPPQ6IPU0 288 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 MFSD5Q6N075 450 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 FOXR2Q6PJQ5 311 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 C1orf186Q6ZWK4 172 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 APTXQ7Z2E3 356 aaKnown RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 C4orf19Q8IY42 314 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms