RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 ARNTLO00327 626 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 PDE8AO60658 829 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 LCP1P13796 627 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 RAC2P15153 192 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 NPR1P16066 1061 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 YBX3P16989 372 aaKnown RBP eCLIP7.41□□□□□ -1.22
LRRC28-220ENST00000561253 NAT1P18440 290 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 GDNFP39905 211 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 CTSWP56202 376 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 GPR85P60893 370 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 RBM10P98175 930 aaKnown RBP7.41□□□□□ -1.22
LRRC28-220ENST00000561253 ZNF792Q3KQV3 632 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 DALRD3Q5D0E6 543 aaKnown RBP7.41□□□□□ -1.22
LRRC28-220ENST00000561253 BRAPQ7Z569 592 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 MTDHQ86UE4 582 aaKnown RBP7.41□□□□□ -1.22
LRRC28-220ENST00000561253 SLCO6A1Q86UG4 719 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 C2CD5Q86YS7 1000 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 NIM1KQ8IY84 436 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 RCBTB1Q8NDN9 531 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 SLC7A14Q8TBB6 771 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 MASTLQ96GX5 879 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 CHAMP1Q96JM3 812 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 CRAMP1Q96RY5 1269 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 JMJD8Q96S16 334 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 MBNL3Q9NUK0 354 aaKnown RBP7.41□□□□□ -1.22
LRRC28-220ENST00000561253 PCDHA2Q9Y5H9 948 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 TIMM13Q9Y5L4 95 aaPredicted RBP7.41□□□□□ -1.22
LRRC28-220ENST00000561253 TAF6LQ9Y6J9 622 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 ANKRD62A6NC57 917 aa7.4□□□□□ -1.22
LRRC28-220ENST00000561253 H0YIN7 160 aa7.4□□□□□ -1.22
LRRC28-220ENST00000561253 RNASE1P07998 156 aaKnown RBP7.4□□□□□ -1.22
LRRC28-220ENST00000561253 RFX5P48382 616 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-220ENST00000561253 GTF2A2P52657 109 aa7.4□□□□□ -1.22
LRRC28-220ENST00000561253 RPL11P62913 178 aaKnown RBP7.4□□□□□ -1.22
LRRC28-220ENST00000561253 MTX1Q13505 466 aa7.4□□□□□ -1.22
LRRC28-220ENST00000561253 MVPQ14764 893 aaKnown RBP7.4□□□□□ -1.22
LRRC28-220ENST00000561253 GALNT18Q6P9A2 607 aa7.4□□□□□ -1.22
LRRC28-220ENST00000561253 DHX37Q8IY37 1157 aaKnown RBP7.4□□□□□ -1.22
LRRC28-220ENST00000561253 GSTCDQ8NEC7 633 aa7.4□□□□□ -1.22
LRRC28-220ENST00000561253 CELF1Q92879 486 aaKnown RBP7.4□□□□□ -1.22
LRRC28-220ENST00000561253 MAGEB10Q96LZ2 347 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-220ENST00000561253 BICC1Q9H694 974 aaKnown RBP7.4□□□□□ -1.22
LRRC28-220ENST00000561253 GREM2Q9H772 168 aa7.4□□□□□ -1.22
LRRC28-220ENST00000561253 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
LRRC28-220ENST00000561253 SLX4Q8IY92 1834 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-220ENST00000561253 PRELPP51888 382 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 GUCY1A3Q02108 690 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 HSF5Q4G112 596 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-220ENST00000561253 ARTNQ5T4W7 220 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 RNF187Q5TA31 235 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-220ENST00000561253 TTLL6Q8N841 843 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.39□□□□□ -1.23
LRRC28-220ENST00000561253 MFSD3Q96ES6 412 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 ALG1Q9BT22 464 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 TRIM39Q9HCM9 518 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 ZBTB40Q9NUA8 1239 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 C19orf73Q9NVV2 129 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 GULP1Q9UBP9 304 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 PRKAB1Q9Y478 270 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 PCDHA9Q9Y5H5 950 aa7.39□□□□□ -1.23
LRRC28-220ENST00000561253 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
LRRC28-220ENST00000561253 NRDCO43847 1150 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 MSCO60682 206 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 CRTAMO95727 393 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 HPXP02790 462 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 HSP90B1P14625 803 aaKnown RBP7.38□□□□□ -1.23
LRRC28-220ENST00000561253 GP2P55259 537 aaKnown RBP7.38□□□□□ -1.23
LRRC28-220ENST00000561253 ERVFC1P60507 584 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 LSAMPQ13449 338 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 GRAPQ13588 217 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 NR0B2Q15466 257 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 KIZQ2M2Z5 673 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 LMBR1LQ6UX01 489 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 OLFM4Q6UX06 510 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 LBX2Q6XYB7 198 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 GRAPLQ8TC17 118 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-220ENST00000561253 ZFP64Q9NPA5 681 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 C9orf78Q9NZ63 289 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-220ENST00000561253 IMPACTQ9P2X3 320 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 MAGEC2Q9UBF1 373 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-220ENST00000561253 CTNND2Q9UQB3 1225 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 PCDHA8Q9Y5H6 950 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 LTBP1Q14766 1721 aa7.38□□□□□ -1.23
LRRC28-220ENST00000561253 DUOX1Q9NRD9 1551 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 IRS2Q9Y4H2 1338 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 A0A1W2PQJ5 194 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 BBOX1O75936 387 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 RASGRP1O95267 797 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 GNAI3P08754 354 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 UBTFL1P0CB47 393 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-220ENST00000561253 CORO7P57737 925 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 RPS8P62241 208 aaKnown RBP7.37□□□□□ -1.23
LRRC28-220ENST00000561253 CCDC152Q4G0S7 254 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 FGD2Q7Z6J4 655 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 ITPRIPQ8IWB1 547 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 SIRT2Q8IXJ6 389 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 FTSJ3Q8IY81 847 aaKnown RBP7.37□□□□□ -1.23
LRRC28-220ENST00000561253 ABI1Q8IZP0 508 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 NUP43Q8NFH3 380 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms