RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
TPM1-229ENST00000561242 BAIAP3O94812 1187 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 C22orf31O95567 290 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 ACRP10323 421 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 GHRP10912 638 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 CYP11B2P19099 503 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 ATP4AP20648 1035 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 MATR3P43243 847 aaKnown RBP eCLIP11.87□□□□□ -0.51
TPM1-229ENST00000561242 RARRES1P49788 294 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 KARSQ15046 597 aaKnown RBP11.87□□□□□ -0.51
TPM1-229ENST00000561242 PCBP1Q15365 356 aaKnown RBP eCLIP11.87□□□□□ -0.51
TPM1-229ENST00000561242 SPECC1Q5M775 1068 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 KANK3Q6NY19 840 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 RUFY4Q6ZNE9 571 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 TSHZ1Q6ZSZ6 1077 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 OTOP2Q7RTS6 562 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 SRGAP1Q7Z6B7 1085 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 GPBP1Q86WP2 473 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 KIAA0319LQ8IZA0 1049 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 PDILTQ8N807 584 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 PRPF31Q8WWY3 499 aaKnown RBP11.87□□□□□ -0.51
TPM1-229ENST00000561242 LARP4BQ92615 738 aaKnown RBP11.87□□□□□ -0.51
TPM1-229ENST00000561242 CLIC6Q96NY7 704 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 TRIM6Q9C030 488 aaPredicted RBP11.87□□□□□ -0.51
TPM1-229ENST00000561242 POLR3FQ9H1D9 316 aaPredicted RBP11.87□□□□□ -0.51
TPM1-229ENST00000561242 MAGEF1Q9HAY2 307 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 DACT1Q9NYF0 836 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 RCOR1Q9UKL0 485 aa11.87□□□□□ -0.51
TPM1-229ENST00000561242 PP2D1A8MPX8 630 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 IDEP14735 1019 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 BMP8BP34820 402 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 EFNA5P52803 228 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 PKP1Q13835 747 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 PTPAQ15257 358 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 FAM26DQ5JW98 314 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 MARCH8Q5T0T0 291 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 ADALQ6DHV7 355 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 ZNF365Q70YC5 407 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 CCDC65Q8IXS2 484 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 ABI1Q8IZP0 508 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 MYCT1Q8N699 235 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 SYT2Q8N9I0 419 aaPredicted RBP11.86□□□□□ -0.51
TPM1-229ENST00000561242 RNF149Q8NC42 400 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
TPM1-229ENST00000561242 DHX58Q96C10 678 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 EPSTI1Q96J88 318 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 OSMRQ99650 979 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 ADPGKQ9BRR6 497 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 DHX33Q9H6R0 707 aaKnown RBP11.86□□□□□ -0.51
TPM1-229ENST00000561242 C17orf75Q9HAS0 396 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 FBXO2Q9UK22 296 aaPredicted RBP11.86□□□□□ -0.51
TPM1-229ENST00000561242 PCDHA7Q9UN72 937 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 PCDHB7Q9Y5E2 793 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 MORC2Q9Y6X9 1032 aaPredicted RBP11.86□□□□□ -0.51
TPM1-229ENST00000561242 SMCHD1A6NHR9 2005 aa11.86□□□□□ -0.51
TPM1-229ENST00000561242 A0A087WWV3 80 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.85□□□□□ -0.51
TPM1-229ENST00000561242 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.85□□□□□ -0.51
TPM1-229ENST00000561242 A0A1W2PPC1 479 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 TMEM150BA6NC51 233 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 K7ERI5 159 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 PLCG1P19174 1290 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 SCP2P22307 547 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 EIF4BP23588 611 aaKnown RBP11.85□□□□□ -0.51
TPM1-229ENST00000561242 SYKP43405 635 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 RBL2Q08999 1139 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 LAMTOR4Q0VGL1 99 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 TARBP2Q15633 366 aaKnown RBP11.85□□□□□ -0.51
TPM1-229ENST00000561242 MAPK6Q16659 721 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 RAD54LQ92698 747 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 BICD1Q96G01 975 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 TCHPQ9BT92 498 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 KMT5AQ9NQR1 393 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 C1orf112Q9NSG2 853 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 KCNH3Q9ULD8 1083 aa11.85□□□□□ -0.51
TPM1-229ENST00000561242 A0A087WZ62 844 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.84□□□□□ -0.51
TPM1-229ENST00000561242 POLR2DO15514 142 aaKnown RBP11.84□□□□□ -0.51
TPM1-229ENST00000561242 KIF20AO95235 890 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 CMA1P23946 247 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 AXLP30530 894 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 HOXC8P31273 242 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 NAMPTP43490 491 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 ADAM17P78536 824 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 MCM6Q14566 821 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 HSP90AA2PQ14568 343 aaPredicted RBP11.84□□□□□ -0.51
TPM1-229ENST00000561242 IL17AQ16552 155 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 HYIQ5T013 277 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 SPOUT1Q5T280 376 aaKnown RBP11.84□□□□□ -0.51
TPM1-229ENST00000561242 TWF2Q6IBS0 349 aaKnown RBP11.84□□□□□ -0.51
TPM1-229ENST00000561242 MYOCDQ8IZQ8 938 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 CNNM3Q8NE01 707 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 DBF4BQ8NFT6 615 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 PHOSPHO2Q8TCD6 241 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 MRPS27Q92552 414 aaKnown RBP11.84□□□□□ -0.51
TPM1-229ENST00000561242 PGBD4Q96DM1 585 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 ZNF668Q96K58 619 aaPredicted RBP11.84□□□□□ -0.51
TPM1-229ENST00000561242 FDXACB1Q9BRP7 624 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms