RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SPOCD1Q6ZMY3 1216 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 ELOA2Q8IYF1 753 aaPredicted RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 GIMAP8Q8ND71 665 aaPredicted RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 TRPV1Q8NER1 839 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 ENGASEQ8NFI3 743 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 TRIB2Q92519 343 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 MMTAG2Q9BU76 263 aaKnown RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 TTC12Q9H892 705 aaPredicted RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 PCDHA12Q9UN75 941 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 GNEQ9Y223 722 aaKnown RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 DDX49Q9Y6V7 483 aaKnown RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 MYH7BA7E2Y1 1941 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 ZNFX1Q9P2E3 1918 aaKnown RBP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 A6NJR5 290 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 EML1O00423 815 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 FOXN1O15353 648 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 GADD45BO75293 160 aaPredicted RBP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 PRPF40AO75400 957 aaKnown RBP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 LGR5O75473 907 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 FARP2O94887 1054 aaPredicted RBP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 STBD1O95210 358 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 CCNE2O96020 404 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 XRCC6P12956 609 aaKnown RBP eCLIP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 RPA1P27694 616 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 ADH6P28332 368 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 SFNP31947 248 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 CEBPZQ03701 1054 aaKnown RBP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 ARHGAP1Q07960 439 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 SNW1Q13573 536 aaKnown RBP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 NEDD9Q14511 834 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 TTLL4Q14679 1199 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 EPHA7Q15375 998 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 WDR44Q5JSH3 913 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 LRCH2Q5VUJ6 765 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 MFSD14CQ5VZR4 134 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 ABHD15Q6UXT9 468 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 USP49Q70CQ1 688 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 FBXO16Q8IX29 292 aaPredicted RBP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 SMAP1Q8IYB5 467 aaPredicted RBP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 TSC1Q92574 1164 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 CLIC6Q96NY7 704 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 ZNF577Q9BSK1 485 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 POLR3CQ9BUI4 534 aaPredicted RBP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 TEKT3Q9BXF9 490 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 RAB34Q9BZG1 259 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 CSRNP2Q9H175 543 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 UPF3AQ9H1J1 476 aaKnown RBP6.15□□□□□ -1.42
ZEB1-220ENST00000560909 UNC45AQ9H3U1 944 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 BCAS3Q9H6U6 928 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 GDPD2Q9HCC8 539 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 PDGFCQ9NRA1 345 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 PTPN22Q9Y2R2 807 aa6.15□□□□□ -1.42
ZEB1-220ENST00000560909 RBBP6Q7Z6E9 1792 aaKnown RBP6.15□□□□□ -1.43
ZEB1-220ENST00000560909 GSTTP1A0A1W2PQM5 241 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 VWA3AA6NCI4 1184 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 WDR64B1ANS9 1081 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 GOLGA6L22H0YM25 854 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 CTAGE5O15320 804 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 SEPT4O43236 478 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 ADCY6O43306 1168 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 ADCY3O60266 1144 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 GAS7O60861 476 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 DUSP11O75319 330 aaKnown RBP6.14□□□□□ -1.43
ZEB1-220ENST00000560909 PPFIA4O75335 1185 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 SLITRK3O94933 977 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 HMGCRP04035 888 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 PRKCSHP14314 528 aaPredicted RBP6.14□□□□□ -1.43
ZEB1-220ENST00000560909 NCLP19338 710 aaKnown RBP6.14□□□□□ -1.43
ZEB1-220ENST00000560909 PTMSP20962 102 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 CYP2C19P33261 490 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 TECP42680 631 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 ME1P48163 572 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 CTCFP49711 727 aaPredicted RBP6.14□□□□□ -1.43
ZEB1-220ENST00000560909 JAK3P52333 1124 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 CACNB2Q08289 660 aaPredicted RBP6.14□□□□□ -1.43
ZEB1-220ENST00000560909 NFKBIBQ15653 356 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 PKN2Q16513 984 aaKnown RBP6.14□□□□□ -1.43
ZEB1-220ENST00000560909 TMEM266Q2M3C6 531 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 CCDC144BQ3MJ40 725 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 TMEM119Q4V9L6 283 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 NAALADL2Q58DX5 795 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 TMEM63BQ5T3F8 832 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 CNNM4Q6P4Q7 775 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 SEPT14Q6ZU15 432 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 FMR1NBQ8N0W7 255 aaPredicted RBP6.14□□□□□ -1.43
ZEB1-220ENST00000560909 PPTC7Q8NI37 304 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 NEK9Q8TD19 979 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 AFAP1L1Q8TED9 768 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 LRRC15Q8TF66 581 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 GJA10Q969M2 543 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 EPSTI1Q96J88 318 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 TIGD1Q96MW7 591 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 PNMA5Q96PV4 448 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 GPR20Q99678 358 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 SDF4Q9BRK5 362 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 JPH1Q9HDC5 661 aaPredicted RBP6.14□□□□□ -1.43
ZEB1-220ENST00000560909 TUFT1Q9NNX1 390 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 PRDM10Q9NQV6 1147 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 SLC9A2Q9UBY0 812 aa6.14□□□□□ -1.43
ZEB1-220ENST00000560909 LRWD1Q9UFC0 647 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms