RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 LMCD1Q9NZU5 365 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 NRBP1Q9UHY1 535 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 PCDHB6Q9Y5E3 794 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 PEAK1Q9H792 1746 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 NPTXRO95502 500 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 CIITAP33076 1130 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 NPEPPSP55786 919 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 CCDC85BQ15834 202 aaPredicted RBP10.51□□□□□ -0.73
TRPM1-212ENST00000560801 AAK1Q2M2I8 961 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 BTBD8Q5XKL5 378 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 OTUD6BQ8N6M0 293 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 PXYLP1Q8TE99 480 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 C12orf42Q96LP6 360 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 ZNF558Q96NG5 402 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 NT5C1BQ96P26 610 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 TRPC7Q9HCX4 862 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 HDAC6Q9UBN7 1215 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 TOPAZ1Q8N9V7 1692 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 COL22A1Q8NFW1 1626 aaPredicted RBP10.51□□□□□ -0.73
TRPM1-212ENST00000560801 CRYBG1Q9Y4K1 1723 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 SCARA5Q6ZMJ2 495 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 EHD2Q9NZN4 543 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 XRCC6P12956 609 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 ATP2A2P16615 1042 aaKnown RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 PLCB3Q01970 1234 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 SH3D19Q5HYK7 790 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 CELF3Q5SZQ8 465 aaKnown RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 OXER1Q8TDS5 423 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 IL17RBQ9NRM6 502 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 CAVIN2O95810 425 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 NR2F2P24468 414 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 CACNB2Q08289 660 aaPredicted RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 LRRC41Q15345 812 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 SEPT5Q99719 369 aaPredicted RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 FAM213AQ9BRX8 229 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 PDGFCQ9NRA1 345 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 ARP10275 920 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 UBA1P22314 1058 aaKnown RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 PSMC2P35998 433 aaKnown RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 NNMTP40261 264 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 CYP27A1Q02318 531 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 IFI16Q16666 785 aaKnown RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 MGAT5BQ3V5L5 792 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 HOOK3Q86VS8 718 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 SPATA2LQ8IUW3 424 aaPredicted RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 FAM186BQ8IYM0 893 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 DCP1BQ8IZD4 617 aaKnown RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 LEO1Q8WVC0 666 aaPredicted RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 HEXIM2Q96MH2 286 aaKnown RBP10.5□□□□□ -0.73
TRPM1-212ENST00000560801 SENP7Q9BQF6 1050 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 ARHGAP39Q9C0H5 1083 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 UBN1Q9NPG3 1134 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 GJB4Q9NTQ9 266 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 WBP1LQ9NX94 342 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 STRIP2Q9ULQ0 834 aa10.5□□□□□ -0.73
TRPM1-212ENST00000560801 H7C4K7 107 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 BNIP3LO60238 219 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 CD58P19256 250 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 POLR2BP30876 1174 aaKnown RBP10.49□□□□□ -0.73
TRPM1-212ENST00000560801 RNASE9P60153 205 aaKnown RBP10.49□□□□□ -0.73
TRPM1-212ENST00000560801 CHRDL2Q6WN34 429 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 ANKEF1Q9NU02 776 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 CPSF3Q9UKF6 684 aaKnown RBP10.49□□□□□ -0.73
TRPM1-212ENST00000560801 PCDHB4Q9Y5E5 795 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 TRPM3Q9HCF6 1732 aaPredicted RBP10.49□□□□□ -0.73
TRPM1-212ENST00000560801 GOLGA6L9A6NEM1 432 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 TMEM110-MUSTN1A8MSY1 372 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 SMIM10L2AP0DMW4 78 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 SMIM10L2BP0DMW5 78 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 MTFR1Q15390 333 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 ATF7IP2Q5U623 682 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 CCDC114Q96M63 670 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 ZNF512Q96ME7 567 aaPredicted RBP10.49□□□□□ -0.73
TRPM1-212ENST00000560801 CYP26B1Q9NR63 512 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 KLK14Q9P0G3 267 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 HIP1RO75146 1068 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 CYP2C18P33260 490 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 LRRC8DQ7L1W4 858 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 VSIG10LQ86VR7 867 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 TEX2Q8IWB9 1127 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 TIPINQ9BVW5 301 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 RIOX1Q9H6W3 641 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 TLE6Q9H808 572 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 TTLL3Q9Y4R7 772 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 CDY2AQ9Y6F7 541 aa10.49□□□□□ -0.73
TRPM1-212ENST00000560801 CD4P01730 458 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 CCND3P30281 292 aaPredicted RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 PPM1AP35813 382 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 RECQLP46063 649 aaPredicted RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 UBASH3AP57075 661 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 AMPD2Q01433 879 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 GOLGA6L1Q8N7Z2 621 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 NELFBQ8WX92 580 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 AGO2Q9UKV8 859 aaKnown RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 XYLBO75191 536 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 EYA4O95677 639 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 UQCRHP07919 91 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms