RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 SPECC1LQ69YQ0 1117 aa13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 APTXQ7Z2E3 356 aaKnown RBP13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 NELFCDQ8IXH7 590 aa13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 TCP11Q8WWU5 503 aa13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 ACCSQ96QU6 501 aa13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 MKNK1Q9BUB5 465 aa13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 GBP3Q9H0R5 595 aa13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 BCAS3Q9H6U6 928 aa13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 METTL14Q9HCE5 456 aaKnown RBP13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 RTN4Q9NQC3 1192 aaKnown RBP13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 FAM184BQ9ULE4 1060 aa13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 COL1A2P08123 1366 aa13.03□□□□□ -0.32
AC087878.1-201ENST00000560709 SORBS3O60504 671 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 GNRH1P01148 92 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 ATP4AP20648 1035 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 NR2F2P24468 414 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 HOXD10P28358 340 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 ADCYAP1R1P41586 468 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 NAMPTP43490 491 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 DNM2P50570 870 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 CASP5P51878 434 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 LACTBP83111 547 aaPredicted RBP13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 TNFAIP2Q03169 654 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 ARHGEF6Q15052 776 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 MAN2A1Q16706 1144 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 DGKDQ16760 1214 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 ZNF484Q5JVG2 852 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 FKBP15Q5T1M5 1219 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 TMC6Q7Z403 805 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 IRF2BP1Q8IU81 584 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 SLC9A9Q8IVB4 645 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 C12orf56Q8IXR9 622 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 ZNF784Q8NCA9 323 aaPredicted RBP13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 OR6J1Q8NGC5 347 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 NAP1L5Q96NT1 182 aaPredicted RBP13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 TUBGCP2Q9BSJ2 902 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 KMT5AQ9NQR1 393 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 PDGFCQ9NRA1 345 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 GJD2Q9UKL4 321 aa13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
AC087878.1-201ENST00000560709 SFI1A8K8P3 1242 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 MAGEB2O15479 319 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 ZNF500O60304 480 aaPredicted RBP13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 MAFO75444 373 aaPredicted RBP13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 PRPF6O94906 941 aaKnown RBP13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 IGHA2P01877 340 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 LGALS2P05162 132 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 EPB41P11171 864 aaKnown RBP13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 SFPQP23246 707 aaKnown RBP eCLIP13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 NMT1P30419 496 aaKnown RBP13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 PEX3P56589 373 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 TBC1D8BQ0IIM8 1120 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 GRM1Q13255 1194 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 ADAM9Q13443 819 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 IER5Q5VY09 327 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 MFSD14CQ5VZR4 134 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 HAUS6Q7Z4H7 955 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 FRMD5Q7Z6J6 570 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 PPFIBP1Q86W92 1011 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 RETREG2Q8NC44 543 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 GLIS3Q8NEA6 775 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 CCDC112Q8NEF3 446 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 NOC4LQ9BVI4 516 aaKnown RBP13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 FGFBP2Q9BYJ0 223 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 POLR3FQ9H1D9 316 aaPredicted RBP13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 XPNPEP1Q9NQW7 623 aa13.01□□□□□ -0.33
AC087878.1-201ENST00000560709 KIAA0391O15091 583 aaKnown RBP13□□□□□ -0.33
AC087878.1-201ENST00000560709 NR3C1P04150 777 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 AKR1A1P14550 325 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 SMPD1P17405 629 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 CYP2B6P20813 491 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 PTGS1P23219 599 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 ARL2P36404 184 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 PBX1P40424 430 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 PSMC4P43686 418 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 NPTX2P47972 431 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 CPT1AP50416 773 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 SP3Q02447 781 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 MXD4Q14582 209 aaPredicted RBP13□□□□□ -0.33
AC087878.1-201ENST00000560709 PLCB4Q15147 1175 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 CCDC144BQ3MJ40 725 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 HSP90AA4PQ58FG1 418 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 MAEAQ7L5Y9 396 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 CREBRFQ8IUR6 639 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 MAP4K3Q8IVH8 894 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 LRRC8AQ8IWT6 810 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 COPS5Q92905 334 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 CEP89Q96ST8 783 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 NUP58Q9BVL2 599 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 INTS13Q9NVM9 706 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 TAB2Q9NYJ8 693 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 ARHGAP28Q9P2N2 729 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 TRPC6Q9Y210 931 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 GNEQ9Y223 722 aaKnown RBP13□□□□□ -0.33
AC087878.1-201ENST00000560709 FRMD4BQ9Y2L6 1034 aa13□□□□□ -0.33
AC087878.1-201ENST00000560709 ZMYM2Q9UBW7 1377 aa12.99□□□□□ -0.33
AC087878.1-201ENST00000560709 IGKV6-21A0A0C4DH24 114 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms