RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 RESP18Q5W5W9 173 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 CNKSR3Q6P9H4 555 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 RUFY4Q6ZNE9 571 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 TSHZ1Q6ZSZ6 1077 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 SV2BQ7L1I2 683 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 SLC17A8Q8NDX2 589 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 SEPT8Q92599 483 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 EPSTI1Q96J88 318 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 IFT74Q96LB3 600 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 CLIC6Q96NY7 704 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 PNMA5Q96PV4 448 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 WNT8AQ9H1J5 351 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 COL4A3BPQ9Y5P4 624 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 CDY2AQ9Y6F7 541 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 TNRC18O15417 2968 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 ABHD14A-ACY1A0A1B0GW23 586 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 E9PMD0 336 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 FGBP02675 491 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 MYL1P05976 194 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 SYN1P17600 705 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 PLCG1P19174 1290 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 EIF4BP23588 611 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 MAGEA10P43363 369 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 PHKA2P46019 1235 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 GPC3P51654 580 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 CLCN3P51790 818 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 CCL23P55773 120 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 NLRP11P59045 1033 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 MGAT3Q09327 533 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 IKBKEQ14164 716 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 KARSQ15046 597 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 RINT1Q6NUQ1 792 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 CLEC17AQ6ZS10 378 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 SRGAP1Q7Z6B7 1085 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 RAD54LQ92698 747 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 UBE2OQ9C0C9 1292 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 C2orf40Q9H1Z8 148 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 LARSQ9P2J5 1176 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 MKI67P46013 3256 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 MICAL3Q7RTP6 2002 aa13.37□□□□□ -0.27
RABGGTA-215ENST00000560207 FAM237AA0A1B0GTK4 181 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 ZBTB39O15060 712 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 USO1O60763 962 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 GPR32O75388 356 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 CHRNA1P02708 482 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 CSF2RAP15509 400 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 ARL2P36404 184 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 NAMPTP43490 491 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 EFNA5P52803 228 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 SMTNP53814 917 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 SLC12A3P55017 1021 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 GRIN1Q05586 938 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 LAMTOR4Q0VGL1 99 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 ECM1Q16610 540 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 PLEKHG4Q58EX7 1191 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 FBXO47Q5MNV8 452 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 KANK3Q6NY19 840 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 TRAF7Q6Q0C0 670 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 SHC4Q6S5L8 630 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 C1orf186Q6ZWK4 172 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 RHPN2Q8IUC4 686 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 ZBTB8OSQ8IWT0 167 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 PPP1R13LQ8WUF5 828 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 PRPF31Q8WWY3 499 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 NLRP7Q8WX94 980 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 GBP4Q96PP9 640 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 CHST12Q9NRB3 414 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 KCNH3Q9ULD8 1083 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 TET1Q8NFU7 2136 aa13.36□□□□□ -0.27
RABGGTA-215ENST00000560207 TMEM150BA6NC51 233 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 RPS6KA5O75582 802 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 SSBP05455 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 KRT18P05783 430 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 CTSHP09668 335 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 DARSP14868 501 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 AXLP30530 894 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 PAK2Q13177 524 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 FAM102BQ5T8I3 360 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 CEP57L1Q8IYX8 460 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 RSPH1Q8WYR4 309 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 MRPS27Q92552 414 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 WNT8BQ93098 351 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 SCLYQ96I15 445 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 PRIMPOLQ96LW4 560 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 NTPCRQ9BSD7 190 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 IFIH1Q9BYX4 1025 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 ADAMTS10Q9H324 1103 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 XPNPEP1Q9NQW7 623 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 BLOC1S4Q9NUP1 217 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 UMODL1Q5DID0 1318 aa13.35□□□□□ -0.27
RABGGTA-215ENST00000560207 GOLGA6L22H0YM25 854 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 VTNP04004 478 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 SKIP12755 728 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms