RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 NCOA7Q8NI08 942 aa6.69□□□□□ -1.34
USP3-215ENST00000559771 LMBR1Q8WVP7 490 aa6.69□□□□□ -1.34
USP3-215ENST00000559771 PIBF1Q8WXW3 757 aa6.69□□□□□ -1.34
USP3-215ENST00000559771 SPZ1Q9BXG8 430 aa6.69□□□□□ -1.34
USP3-215ENST00000559771 UBE2ZQ9H832 354 aaPredicted RBP6.69□□□□□ -1.34
USP3-215ENST00000559771 EHMT1Q9H9B1 1298 aa6.69□□□□□ -1.34
USP3-215ENST00000559771 MLXIPQ9HAP2 919 aa6.69□□□□□ -1.34
USP3-215ENST00000559771 INSL6Q9Y581 213 aa6.69□□□□□ -1.34
USP3-215ENST00000559771 TRIOO75962 3097 aa6.69□□□□□ -1.34
USP3-215ENST00000559771 EMSYQ7Z589 1322 aa6.69□□□□□ -1.34
USP3-215ENST00000559771 LOXHD1Q8IVV2 1947 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 GSTTP1A0A1W2PQM5 241 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 H3BNC9 293 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 FIBPO43427 364 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 STAM2O75886 525 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 F11P03951 625 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 AMHP03971 560 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 CTSHP09668 335 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 IL9P15248 144 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 ITGB5P18084 799 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 SMARCA1P28370 1054 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 PLA2G5P39877 138 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 MGAT3Q09327 533 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 NEDD9Q14511 834 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 LEXMQ3ZCV2 418 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 CHSY3Q70JA7 882 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 RPAINQ86UA6 219 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 RNF135Q8IUD6 432 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 FAM178BQ8IXR5 827 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 ZNF654Q8IZM8 581 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 MYOCDQ8IZQ8 938 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 CMTR1Q8N1G2 835 aaKnown RBP6.68□□□□□ -1.34
USP3-215ENST00000559771 IL27Q8NEV9 243 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 NEK9Q8TD19 979 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 LINC01599Q8WXQ3 324 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 ZBTB10Q96DT7 871 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 MRPL38Q96DV4 380 aaKnown RBP6.68□□□□□ -1.34
USP3-215ENST00000559771 PCYT2Q99447 389 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 MAP3K14Q99558 947 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 SENP7Q9BQF6 1050 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 OCSTAMPQ9BR26 566 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 C1QTNF1Q9BXJ1 281 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 USP26Q9BXU7 913 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 LSG1Q9H089 658 aaKnown RBP6.68□□□□□ -1.34
USP3-215ENST00000559771 SLC24A3Q9HC58 644 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 RBM8AQ9Y5S9 174 aaKnown RBP6.68□□□□□ -1.34
USP3-215ENST00000559771 WDFY4Q6ZS81 3184 aa6.68□□□□□ -1.34
USP3-215ENST00000559771 hCG_1642624A0A1W2PR95 340 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 MBLAC1A4D2B0 266 aaPredicted RBP6.67□□□□□ -1.34
USP3-215ENST00000559771 FAM86C2PA6NEL3 165 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 PI4K2BG5E9Z4 385 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 SH2B2O14492 632 aaPredicted RBP6.67□□□□□ -1.34
USP3-215ENST00000559771 GPR37L1O60883 481 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 CAND2O75155 1236 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 DDAH1O94760 285 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 RXRAP19793 462 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 KCNA5P22460 613 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 SSTR3P32745 418 aaPredicted RBP6.67□□□□□ -1.34
USP3-215ENST00000559771 GPC1P35052 558 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 LTBRP36941 435 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 CTBSQ01459 385 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 TRDNQ13061 729 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 TRAF1Q13077 416 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 CAMK1Q14012 370 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 LPIN1Q14693 890 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 UBE2SQ16763 222 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 GNPTABQ3T906 1256 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 UTP14CQ5TAP6 766 aaKnown RBP6.67□□□□□ -1.34
USP3-215ENST00000559771 CATIPQ7Z7H3 387 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 RTN4RL1Q86UN2 441 aaPredicted RBP6.67□□□□□ -1.34
USP3-215ENST00000559771 TMEM192Q8IY95 271 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 SEPT8Q92599 483 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 ZNF689Q96CS4 500 aaPredicted RBP6.67□□□□□ -1.34
USP3-215ENST00000559771 AGO3Q9H9G7 860 aaKnown RBP6.67□□□□□ -1.34
USP3-215ENST00000559771 UBIAD1Q9Y5Z9 338 aa6.67□□□□□ -1.34
USP3-215ENST00000559771 TTC3P53804 2025 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 KAT6AQ92794 2004 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 ERICH2A1L162 156 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 C5orf67F2Z3F1 127 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 H3BQ06 376 aaPredicted RBP6.66□□□□□ -1.34
USP3-215ENST00000559771 NOP56O00567 594 aaKnown RBP6.66□□□□□ -1.34
USP3-215ENST00000559771 ENPP3O14638 875 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 GRM6O15303 877 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 PRC1O43663 620 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 H2AFB1P0C5Y9 115 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 H2AFB2P0C5Z0 115 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 GHRP10912 638 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 TCF7P36402 384 aaPredicted RBP6.66□□□□□ -1.34
USP3-215ENST00000559771 IRX6P78412 446 aaPredicted RBP6.66□□□□□ -1.34
USP3-215ENST00000559771 ARHGAP4P98171 946 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 SP4Q02446 784 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 DLX2Q07687 328 aaPredicted RBP6.66□□□□□ -1.34
USP3-215ENST00000559771 GPM6BQ13491 265 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 NECTIN1Q15223 517 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 TCEAL5Q5H9L2 206 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 FBXO47Q5MNV8 452 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 XRRA1Q6P2D8 792 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 RALYLQ86SE5 291 aaKnown RBP6.66□□□□□ -1.34
USP3-215ENST00000559771 RAB11FIP4Q86YS3 637 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 BANK1Q8NDB2 785 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms