RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TTC12Q9H892 705 aaPredicted RBP14.1□□□□□ -0.15
LRRC28-214ENST00000559433 RC3H2Q9HBD1 1191 aaKnown RBP14.1□□□□□ -0.15
LRRC28-214ENST00000559433 PRDM6Q9NQX0 595 aa14.1□□□□□ -0.15
LRRC28-214ENST00000559433 CYP26B1Q9NR63 512 aa14.1□□□□□ -0.15
LRRC28-214ENST00000559433 RGL1Q9NZL6 768 aa14.1□□□□□ -0.15
LRRC28-214ENST00000559433 WRAP73Q9P2S5 460 aaPredicted RBP14.1□□□□□ -0.15
LRRC28-214ENST00000559433 FNDC1Q4ZHG4 1894 aaPredicted RBP14.1□□□□□ -0.15
LRRC28-214ENST00000559433 IGKV6-21A0A0C4DH24 114 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 MAFO75444 373 aaPredicted RBP14.09□□□□□ -0.15
LRRC28-214ENST00000559433 DGKIO75912 1065 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 CD2BP2O95400 341 aaKnown RBP14.09□□□□□ -0.15
LRRC28-214ENST00000559433 EIF4BP23588 611 aaKnown RBP14.09□□□□□ -0.15
LRRC28-214ENST00000559433 YWHABP31946 246 aaKnown RBP14.09□□□□□ -0.15
LRRC28-214ENST00000559433 SARSP49591 514 aaKnown RBP14.09□□□□□ -0.15
LRRC28-214ENST00000559433 NPEPPSP55786 919 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 CDC42EP1Q00587 391 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 GPM6BQ13491 265 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 EPC2Q52LR7 807 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 NOSTRINQ8IVI9 506 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 TPH2Q8IWU9 490 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 C4orf19Q8IY42 314 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 TMX3Q96JJ7 454 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 ASB2Q96Q27 587 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 MTMR9Q96QG7 549 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 JPH2Q9BR39 696 aaPredicted RBP14.09□□□□□ -0.15
LRRC28-214ENST00000559433 COL25A1Q9BXS0 654 aaPredicted RBP14.09□□□□□ -0.15
LRRC28-214ENST00000559433 ZSWIM4Q9H7M6 989 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 RGS18Q9NS28 235 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 C1orf112Q9NSG2 853 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 SUCLA2Q9P2R7 463 aaPredicted RBP14.09□□□□□ -0.15
LRRC28-214ENST00000559433 COG5Q9UP83 839 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 RWDD3Q9Y3V2 267 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 KIF3AQ9Y496 699 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 PCDHB7Q9Y5E2 793 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 ATG2AQ2TAZ0 1938 aa14.09□□□□□ -0.15
LRRC28-214ENST00000559433 DARSP14868 501 aaKnown RBP14.08□□□□□ -0.16
LRRC28-214ENST00000559433 ZSCAN20P17040 1043 aaPredicted RBP14.08□□□□□ -0.16
LRRC28-214ENST00000559433 CTNNB1P35222 781 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 RFC5P40937 340 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 MCM2P49736 904 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 POLGP54098 1239 aaPredicted RBP14.08□□□□□ -0.16
LRRC28-214ENST00000559433 ZNF174Q15697 407 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 TTC38Q5R3I4 469 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 OTUD6AQ7L8S5 288 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 RHPN2Q8IUC4 686 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 CRIPAKQ8N1N5 446 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 NEK9Q8TD19 979 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 SLC7A3Q8WY07 619 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 HLA-CQ95604 372 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 ZNF689Q96CS4 500 aaPredicted RBP14.08□□□□□ -0.16
LRRC28-214ENST00000559433 EIF2AK1Q9BQI3 630 aaKnown RBP14.08□□□□□ -0.16
LRRC28-214ENST00000559433 TMEM60Q9H2L4 133 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 NOL7Q9UMY1 257 aaKnown RBP14.08□□□□□ -0.16
LRRC28-214ENST00000559433 PPME1Q9Y570 386 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 CUL9Q8IWT3 2517 aa14.08□□□□□ -0.16
LRRC28-214ENST00000559433 POTEMA6NI47 508 aa14.07□□□□□ -0.16
LRRC28-214ENST00000559433 SLITRK3O94933 977 aa14.07□□□□□ -0.16
LRRC28-214ENST00000559433 RB1P06400 928 aa14.07□□□□□ -0.16
LRRC28-214ENST00000559433 FGFR4P22455 802 aa14.07□□□□□ -0.16
LRRC28-214ENST00000559433 ORC2Q13416 577 aaPredicted RBP14.07□□□□□ -0.16
LRRC28-214ENST00000559433 PAN2Q504Q3 1202 aaKnown RBP14.07□□□□□ -0.16
LRRC28-214ENST00000559433 XKR9Q5GH70 373 aa14.07□□□□□ -0.16
LRRC28-214ENST00000559433 SPOUT1Q5T280 376 aaKnown RBP14.07□□□□□ -0.16
LRRC28-214ENST00000559433 SLC24A5Q71RS6 500 aa14.07□□□□□ -0.16
LRRC28-214ENST00000559433 EXOC8Q8IYI6 725 aa14.07□□□□□ -0.16
LRRC28-214ENST00000559433 CMTR2Q8IYT2 770 aaKnown RBP14.07□□□□□ -0.16
LRRC28-214ENST00000559433 ZNF579Q8NAF0 562 aaKnown RBP14.07□□□□□ -0.16
LRRC28-214ENST00000559433 NLRP4Q96MN2 994 aa14.07□□□□□ -0.16
LRRC28-214ENST00000559433 GCOM2Q9BZD3 368 aaPredicted RBP14.07□□□□□ -0.16
LRRC28-214ENST00000559433 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
LRRC28-214ENST00000559433 A0A087WZ62 844 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 C9IYK1 514 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 H3BNC9 293 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 ZBTB39O15060 712 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 OR52Z1P0C646 297 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 BMPR1AP36894 532 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 TRAPPC10P48553 1259 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 GATMP50440 423 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 DSC3Q14574 896 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 EMC2Q15006 297 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 ZNF410Q86VK4 478 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 KSR1Q8IVT5 923 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 CLP1Q92989 425 aaKnown RBP14.06□□□□□ -0.16
LRRC28-214ENST00000559433 TMEM143Q96AN5 459 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 MRPL38Q96DV4 380 aaKnown RBP14.06□□□□□ -0.16
LRRC28-214ENST00000559433 CCDC43Q96MW1 224 aaKnown RBP14.06□□□□□ -0.16
LRRC28-214ENST00000559433 HSD17B14Q9BPX1 270 aa14.06□□□□□ -0.16
LRRC28-214ENST00000559433 FDXACB1Q9BRP7 624 aaPredicted RBP14.06□□□□□ -0.16
LRRC28-214ENST00000559433 C11orf84Q9BUA3 381 aaPredicted RBP14.06□□□□□ -0.16
LRRC28-214ENST00000559433 DHX33Q9H6R0 707 aaKnown RBP14.06□□□□□ -0.16
LRRC28-214ENST00000559433 MRPL42Q9Y6G3 142 aaKnown RBP14.06□□□□□ -0.16
LRRC28-214ENST00000559433 GAS2O43903 313 aaKnown RBP14.05□□□□□ -0.16
LRRC28-214ENST00000559433 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
LRRC28-214ENST00000559433 LINC00271P0C7V0 271 aa14.05□□□□□ -0.16
LRRC28-214ENST00000559433 SFPQP23246 707 aaKnown RBP eCLIP14.05□□□□□ -0.16
LRRC28-214ENST00000559433 U2AF2P26368 475 aaKnown RBP eCLIP14.05□□□□□ -0.16
LRRC28-214ENST00000559433 GJB2P29033 226 aa14.05□□□□□ -0.16
LRRC28-214ENST00000559433 TECP42680 631 aa14.05□□□□□ -0.16
LRRC28-214ENST00000559433 NBR1Q14596 966 aa14.05□□□□□ -0.16
LRRC28-214ENST00000559433 MCTP1Q6DN14 999 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms