RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ZNF710Q8N1W2 664 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 MICALL1Q8N3F8 863 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
SPG11-216ENST00000559347 NEK9Q8TD19 979 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 ZNF668Q96K58 619 aaPredicted RBP12.26□□□□□ -0.45
SPG11-216ENST00000559347 EIF2AK1Q9BQI3 630 aaKnown RBP12.26□□□□□ -0.45
SPG11-216ENST00000559347 PRDM6Q9NQX0 595 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 PPME1Q9Y570 386 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 MYH15Q9Y2K3 1946 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 DENND3A2RUS2 1198 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 DARSP14868 501 aaKnown RBP12.25□□□□□ -0.45
SPG11-216ENST00000559347 ATP2B1P20020 1258 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 EIF4BP23588 611 aaKnown RBP12.25□□□□□ -0.45
SPG11-216ENST00000559347 U2AF2P26368 475 aaKnown RBP eCLIP12.25□□□□□ -0.45
SPG11-216ENST00000559347 TXKP42681 527 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 GNL2Q13823 731 aaKnown RBP12.25□□□□□ -0.45
SPG11-216ENST00000559347 CTTNQ14247 550 aaKnown RBP12.25□□□□□ -0.45
SPG11-216ENST00000559347 DSC3Q14574 896 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 TTC38Q5R3I4 469 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 ZNF410Q86VK4 478 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 FIBCD1Q8N539 461 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 NLRP7Q8WX94 980 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 SLC7A3Q8WY07 619 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 CLP1Q92989 425 aaKnown RBP12.25□□□□□ -0.45
SPG11-216ENST00000559347 SCLT1Q96NL6 688 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 ADAM2Q99965 735 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 JPH2Q9BR39 696 aaPredicted RBP12.25□□□□□ -0.45
SPG11-216ENST00000559347 DHX33Q9H6R0 707 aaKnown RBP12.25□□□□□ -0.45
SPG11-216ENST00000559347 ZSWIM4Q9H7M6 989 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 RGS18Q9NS28 235 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 C1orf112Q9NSG2 853 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 THEGQ9P2T0 379 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 KIF3AQ9Y496 699 aa12.25□□□□□ -0.45
SPG11-216ENST00000559347 C9IYK1 514 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 C5orf67F2Z3F1 127 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 SLITRK3O94933 977 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 LYPLA2O95372 231 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 OR52Z1P0C646 297 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 STAG3L1P0CL83 205 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 CTNNB1P35222 781 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 RFC5P40937 340 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 TRAPPC10P48553 1259 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 MCM2P49736 904 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 GATMP50440 423 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 DNM2P50570 870 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 POLGP54098 1239 aaPredicted RBP12.24□□□□□ -0.45
SPG11-216ENST00000559347 BTG3Q14201 252 aaPredicted RBP12.24□□□□□ -0.45
SPG11-216ENST00000559347 NBR1Q14596 966 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 EMC2Q15006 297 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 SLC24A5Q71RS6 500 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 TPH2Q8IWU9 490 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 TMEM192Q8IY95 271 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 CMTR2Q8IYT2 770 aaKnown RBP12.24□□□□□ -0.45
SPG11-216ENST00000559347 CEP170P1Q96L14 293 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 HSD17B14Q9BPX1 270 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
SPG11-216ENST00000559347 LMCD1Q9NZU5 365 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 SUCLA2Q9P2R7 463 aaPredicted RBP12.24□□□□□ -0.45
SPG11-216ENST00000559347 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
SPG11-216ENST00000559347 RWDD3Q9Y3V2 267 aa12.24□□□□□ -0.45
SPG11-216ENST00000559347 BRWD1Q9NSI6 2320 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 A0A087WZ62 844 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 H3BNC9 293 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 ZBTB39O15060 712 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 GAS2O43903 313 aaKnown RBP12.23□□□□□ -0.45
SPG11-216ENST00000559347 IBSPP21815 317 aaPredicted RBP12.23□□□□□ -0.45
SPG11-216ENST00000559347 FGFR4P22455 802 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 GJB2P29033 226 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 CDC42EP1Q00587 391 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 PAN2Q504Q3 1202 aaKnown RBP12.23□□□□□ -0.45
SPG11-216ENST00000559347 XKR9Q5GH70 373 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 OTUD6AQ7L8S5 288 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 RHPN2Q8IUC4 686 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 NLRP4Q96MN2 994 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 FDXACB1Q9BRP7 624 aaPredicted RBP12.23□□□□□ -0.45
SPG11-216ENST00000559347 BACH2Q9BYV9 841 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 XPNPEP1Q9NQW7 623 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 LRFN2Q9ULH4 789 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 COL4A3BPQ9Y5P4 624 aa12.23□□□□□ -0.45
SPG11-216ENST00000559347 MRPL42Q9Y6G3 142 aaKnown RBP12.23□□□□□ -0.45
SPG11-216ENST00000559347 CSDE1O75534 798 aaKnown RBP12.22□□□□□ -0.45
SPG11-216ENST00000559347 SFPQP23246 707 aaKnown RBP eCLIP12.22□□□□□ -0.45
SPG11-216ENST00000559347 BMPR1AP36894 532 aa12.22□□□□□ -0.45
SPG11-216ENST00000559347 TOB1P50616 345 aaPredicted RBP12.22□□□□□ -0.45
SPG11-216ENST00000559347 GPM6BQ13491 265 aa12.22□□□□□ -0.45
SPG11-216ENST00000559347 ZNF174Q15697 407 aa12.22□□□□□ -0.45
SPG11-216ENST00000559347 KSR1Q8IVT5 923 aa12.22□□□□□ -0.45
SPG11-216ENST00000559347 EXOC8Q8IYI6 725 aa12.22□□□□□ -0.45
SPG11-216ENST00000559347 MTRQ99707 1265 aa12.22□□□□□ -0.45
SPG11-216ENST00000559347 GCOM2Q9BZD3 368 aaPredicted RBP12.22□□□□□ -0.45
SPG11-216ENST00000559347 ELAC1Q9H777 363 aaKnown RBP12.22□□□□□ -0.45
SPG11-216ENST00000559347 IFT122Q9HBG6 1241 aa12.22□□□□□ -0.45
SPG11-216ENST00000559347 TMEM161AQ9NX61 479 aa12.22□□□□□ -0.45
SPG11-216ENST00000559347 PCDHB7Q9Y5E2 793 aa12.22□□□□□ -0.45
SPG11-216ENST00000559347 TDRD15B5MCY1 1934 aaKnown RBP12.21□□□□□ -0.45
SPG11-216ENST00000559347 MED24O75448 989 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 SPATA31C1P0DKV0 1188 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 ZSCAN20P17040 1043 aaPredicted RBP12.21□□□□□ -0.45
SPG11-216ENST00000559347 TECP42680 631 aa12.21□□□□□ -0.45
SPG11-216ENST00000559347 RARRES1P49788 294 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms