RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 IER5Q5VY09 327 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 PPP1R18Q6NYC8 613 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 EP400NLQ6ZTU2 488 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 HFE2Q6ZVN8 426 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 NIPA1Q7RTP0 329 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 RSPH3Q86UC2 560 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 LINC01465Q8N7H1 131 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 ATP8B4Q8TF62 1192 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 LENG9Q96B70 501 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 NEK1Q96PY6 1258 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 FTHL17Q9BXU8 183 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 IGFLR1Q9H665 355 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 ZSWIM6Q9HCJ5 1215 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 RNF19AQ9NV58 838 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 BARHL2Q9NY43 387 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 CGNQ9P2M7 1197 aaKnown RBP6.6□□□□□ -1.35
USP3-212ENST00000559276 TRPC6Q9Y210 931 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 RWDD3Q9Y3V2 267 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 KMT2EQ8IZD2 1858 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 TECTAO75443 2155 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 MUC6Q6W4X9 2439 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 NID2Q14112 1375 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 DDX39AO00148 427 aaKnown RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 FSCN2O14926 492 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 ZBTB43O43298 467 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 NCK2O43639 380 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 GADD45BO75293 160 aaPredicted RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 GPR32O75388 356 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 FOSP01100 380 aaPredicted RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 RPLP2P05387 115 aaKnown RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 CYP3A4P08684 503 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 SARSP49591 514 aaKnown RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 ADCY7P51828 1080 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 AK2P54819 239 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 ERVFC1P60507 584 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 FAM189BP81408 668 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 KRT76Q01546 638 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 COASYQ13057 564 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 PAK2Q13177 524 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 AP3B2Q13367 1082 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 RTN1Q16799 776 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 PFKFB3Q16875 520 aaPredicted RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 NAALADL2Q58DX5 795 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 RNF20Q5VTR2 975 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 JAKMIP3Q5VZ66 844 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 ATL3Q6DD88 541 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 SWSAP1Q6NVH7 229 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 LRRC55Q6ZSA7 311 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 DHX32Q7L7V1 743 aaKnown RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 FAM228AQ86W67 206 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 RNF135Q8IUD6 432 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 TEX2Q8IWB9 1127 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 ZNF710Q8N1W2 664 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 NME8Q8N427 588 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 EFHBQ8N7U6 833 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 SMRP1Q8NCR6 262 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 POF1BQ8WVV4 589 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 FBXL18Q96ME1 805 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 SDF4Q9BRK5 362 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 UPF3BQ9BZI7 483 aaKnown RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 NUP62CLQ9H1M0 184 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 AZI2Q9H6S1 392 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 CWH43Q9H720 699 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 RGS18Q9NS28 235 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 KCND1Q9NSA2 647 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 RBM28Q9NW13 759 aaKnown RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 OGFRQ9NZT2 677 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 MUTYHQ9UIF7 546 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 CD207Q9UJ71 328 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 BARX2Q9UMQ3 279 aaPredicted RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 ST3GAL5Q9UNP4 418 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 MTMR6Q9Y217 621 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 MAFBQ9Y5Q3 323 aaPredicted RBP6.59□□□□□ -1.35
USP3-212ENST00000559276 CYP46A1Q9Y6A2 500 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 DMDP11532 3685 aa6.59□□□□□ -1.35
USP3-212ENST00000559276 MYO15AQ9UKN7 3530 aa6.59□□□□□ -1.36
USP3-212ENST00000559276 MYH9P35579 1960 aaKnown RBP6.58□□□□□ -1.36
USP3-212ENST00000559276 COL1A2P08123 1366 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 KLF18A0A0U1RQI7 1052 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 ESYT2A0FGR8 921 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 GOLGA8AA7E2F4 631 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 GOLGA8BA8MQT2 603 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 LOC730098B7Z3J9 87 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 hCG_1984214I3L0E3 225 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 IPO5O00410 1097 aaKnown RBP6.58□□□□□ -1.36
USP3-212ENST00000559276 PER2O15055 1255 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 ZNF862O60290 1169 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 HBP1O60381 514 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 PPFIA3O75145 1194 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 FGFR1P11362 822 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 NRIP1P48552 1158 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 SLC26A2P50443 739 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 RCAN1P53805 252 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 NHLH1Q02575 133 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 NFX1Q12986 1120 aaKnown RBP6.58□□□□□ -1.36
USP3-212ENST00000559276 KRT32Q14532 448 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 CBX2Q14781 532 aaPredicted RBP6.58□□□□□ -1.36
USP3-212ENST00000559276 NTRK3Q16288 839 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 KIZQ2M2Z5 673 aa6.58□□□□□ -1.36
USP3-212ENST00000559276 ZNF484Q5JVG2 852 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms