RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 LRRC56Q8IYG6 542 aaPredicted RBP6.36□□□□□ -1.39
CASC4-207ENST00000559037 TMEM145Q8NBT3 493 aa6.36□□□□□ -1.39
CASC4-207ENST00000559037 SREK1Q8WXA9 508 aaKnown RBP6.36□□□□□ -1.39
CASC4-207ENST00000559037 LGR4Q9BXB1 951 aa6.36□□□□□ -1.39
CASC4-207ENST00000559037 AP5M1Q9H0R1 490 aa6.36□□□□□ -1.39
CASC4-207ENST00000559037 KCNK12Q9HB15 430 aa6.36□□□□□ -1.39
CASC4-207ENST00000559037 NMRK2Q9NPI5 230 aa6.36□□□□□ -1.39
CASC4-207ENST00000559037 DDX21Q9NR30 783 aaKnown RBP eCLIP6.36□□□□□ -1.39
CASC4-207ENST00000559037 RNF181Q9P0P0 153 aa6.36□□□□□ -1.39
CASC4-207ENST00000559037 CNOT6Q9ULM6 557 aaKnown RBP6.36□□□□□ -1.39
CASC4-207ENST00000559037 NPFFR2Q9Y5X5 522 aa6.36□□□□□ -1.39
CASC4-207ENST00000559037 DDX60Q8IY21 1712 aaKnown RBP6.36□□□□□ -1.39
CASC4-207ENST00000559037 UBN2Q6ZU65 1347 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 TRAV20A0A0B4J274 112 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 HOXB7P09629 217 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 NPR1P16066 1061 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 CDR1P51861 262 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 CAP1Q01518 475 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 TCIRG1Q13488 830 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 SERINC3Q13530 473 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 LONRF2Q1L5Z9 754 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 CRY2Q49AN0 593 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 MBLAC2Q68D91 279 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 KIF6Q6ZMV9 814 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 COPS6Q7L5N1 327 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 MKL1Q969V6 931 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 ZFYVE21Q9BQ24 234 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 NYXQ9GZU5 481 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 PCDHA5Q9Y5H7 936 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 WDR90Q96KV7 1748 aa6.35□□□□□ -1.39
CASC4-207ENST00000559037 RIC1Q4ADV7 1423 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 IBTKQ9P2D0 1353 aaPredicted RBP6.34□□□□□ -1.39
CASC4-207ENST00000559037 KDM2BQ8NHM5 1336 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 CEP350Q5VT06 3117 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 GLTPD2A6NH11 291 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 H7BY64 318 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 NPHP1O15259 732 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 NUAK1O60285 661 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 NTSR2O95665 410 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 NCAM1P13591 858 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 GPTP24298 496 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 CFPP27918 469 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 ALDH1B1P30837 517 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 GNAI1P63096 354 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 PRR5P85299 388 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 ZNF200P98182 395 aaPredicted RBP6.34□□□□□ -1.39
CASC4-207ENST00000559037 INF2Q27J81 1249 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 MTERF2Q49AM1 385 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 ZC3H12BQ5HYM0 836 aaKnown RBP6.34□□□□□ -1.39
CASC4-207ENST00000559037 CCDC103Q8IW40 242 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 PLEKHO2Q8TD55 490 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 CPA5Q8WXQ8 436 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 SEC14L1Q92503 715 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 DPF3Q92784 378 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 IER2Q9BTL4 223 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 GPR27Q9NS67 375 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 MARCH2Q9P0N8 246 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 COA3Q9Y2R0 106 aaPredicted RBP6.34□□□□□ -1.39
CASC4-207ENST00000559037 LAS1LQ9Y4W2 734 aaKnown RBP6.34□□□□□ -1.39
CASC4-207ENST00000559037 KCTD3Q9Y597 815 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 X6R8D5 127 aa6.34□□□□□ -1.39
CASC4-207ENST00000559037 TRPM7Q96QT4 1865 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 ZC3H12DA2A288 527 aaKnown RBP6.33□□□□□ -1.4
CASC4-207ENST00000559037 C22orf46C9J442 243 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 FUCA1P04066 466 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 VEGFAP15692 232 aaPredicted RBP6.33□□□□□ -1.4
CASC4-207ENST00000559037 HSPA6P17066 643 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 IFRD2Q12894 506 aaPredicted RBP6.33□□□□□ -1.4
CASC4-207ENST00000559037 PARP10Q53GL7 1025 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 HSP90AB3PQ58FF7 597 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 OLFM4Q6UX06 510 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 PPP1R42Q7Z4L9 355 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 C1QL4Q86Z23 238 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 SYNE4Q8N205 404 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 C8orf58Q8NAV2 365 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 PLBD2Q8NHP8 589 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 TMEM169Q96HH4 297 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 CRAMP1Q96RY5 1269 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 SPATA9Q9BWV2 254 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 SGPP1Q9BX95 441 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 TAOK3Q9H2K8 898 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 PCDH18Q9HCL0 1135 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 ARHGEF4Q9NR80 690 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 IFT57Q9NWB7 429 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 CHPF2Q9P2E5 772 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 DBF4Q9UBU7 674 aaPredicted RBP6.33□□□□□ -1.4
CASC4-207ENST00000559037 SNED1Q8TER0 1413 aa6.33□□□□□ -1.4
CASC4-207ENST00000559037 ABCC12Q96J65 1359 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 ZBED9Q6R2W3 1325 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 DLX3O60479 287 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 BUB1BO60566 1050 aaPredicted RBP6.32□□□□□ -1.4
CASC4-207ENST00000559037 PPP1R11O60927 126 aaPredicted RBP6.32□□□□□ -1.4
CASC4-207ENST00000559037 NTRK1P04629 796 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 PABPC1P11940 636 aaKnown RBP6.32□□□□□ -1.4
CASC4-207ENST00000559037 IGFBP6P24592 240 aaPredicted RBP6.32□□□□□ -1.4
CASC4-207ENST00000559037 GRIA2P42262 883 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 EPHB3P54753 998 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 CALD1Q05682 793 aaKnown RBP6.32□□□□□ -1.4
CASC4-207ENST00000559037 AIMP1Q12904 312 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms