RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ADAMTS10Q9H324 1103 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 UNC45AQ9H3U1 944 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 TLR9Q9NR96 1032 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 CCDC194A0A1B0GVG4 234 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 PRR33A8MZF0 331 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 MBTPS2O43462 519 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 DCXO43602 365 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 DKC1O60832 514 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 FGF18O76093 207 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 EOMESO95936 686 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 SRGAP2BP0DMP2 458 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 DARSP14868 501 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 PLA2G5P39877 138 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 NRIP1P48552 1158 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 KRT17Q04695 432 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 DLX2Q07687 328 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 RBM23Q86U06 439 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 EXOC8Q8IYI6 725 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 CDCA3Q99618 268 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 NAP1L4Q99733 375 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 GCOM2Q9BZD3 368 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 INO80BQ9C086 356 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 SLKQ9H2G2 1235 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 SEPT9Q9UHD8 586 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 DDX25Q9UHL0 483 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 RAPGEFL1Q9UHV5 662 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 LZTS1Q9Y250 596 aa15.31■□□□□ 0.04
SNRPA1-204ENST00000558020 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 DDX11L8A8MPP1 907 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 MARCH6O60337 910 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 EIF5BO60841 1220 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 FGFR1P11362 822 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 SKIP12755 728 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 GTF2F1P35269 517 aaKnown RBP eCLIP15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 PPM1AP35813 382 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 GPC3P51654 580 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 BMS1Q14692 1282 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 ANKRD1Q15327 319 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 TARBP2Q15633 366 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 LINC01465Q8N7H1 131 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 COLGALT1Q8NBJ5 622 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 RNF169Q8NCN4 708 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 RSPH1Q8WYR4 309 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 FAM20AQ96MK3 541 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 LARP6Q9BRS8 491 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 CHST12Q9NRB3 414 aa15.3■□□□□ 0.04
SNRPA1-204ENST00000558020 A0A0U1RQF3 1178 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 CARNS1A5YM72 827 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 FAM86C2PA6NEL3 165 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 M0R2N6 131 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 LINC01565O15544 149 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 EDIL3O43854 480 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 TBX10O75333 385 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 TDP2O95551 362 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 EYA4O95677 639 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 GCFC2P16383 781 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 IRS1P35568 1242 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 PSMC5P62195 406 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 PLCB3Q01970 1234 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 COASYQ13057 564 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 UGCGQ16739 394 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 LETM2Q2VYF4 491 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 MTERF2Q49AM1 385 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 ECHDC2Q86YB7 292 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 LRRC43Q8N309 656 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 WASF1Q92558 559 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 MSLNLQ96KJ4 702 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 MBOAT7Q96N66 472 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 ZNF558Q96NG5 402 aa15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 NGRNQ9NPE2 291 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-204ENST00000558020 SFPQP23246 707 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 INF2Q27J81 1249 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 PPP4R3AQ6IN85 833 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 KCNT2Q6UVM3 1135 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 ADGRD2Q7Z7M1 963 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 ZNF410Q86VK4 478 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 ETNPPLQ8TBG4 499 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 MRPS27Q92552 414 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 GJA10Q969M2 543 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 CASD1Q96PB1 797 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 MRPL9Q9BYD2 267 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 CWH43Q9H720 699 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 C11orf16Q9NQ32 467 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 SPG21Q9NZD8 308 aa15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 SUCLA2Q9P2R7 463 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-204ENST00000558020 FNDC1Q4ZHG4 1894 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 MAFO75444 373 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 BAG4O95429 457 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 QARSP47897 775 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 ALDH7A1P49419 539 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 ANAPC15P60006 121 aa15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 ERVFC1P60507 584 aa15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 B3GNT9Q6UX72 402 aa15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 NEK8Q86SG6 692 aa15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 SMRP1Q8NCR6 262 aa15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 SLC7A3Q8WY07 619 aa15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 ZNF668Q96K58 619 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 PHF20Q9BVI0 1012 aa15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 ENTPD7Q9NQZ7 604 aa15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 CLEC1BQ9P126 229 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms