RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 MRPS27Q92552 414 aaKnown RBP18.02■□□□□ 0.48
SCFD1-224ENST00000557713 CCDC136Q96JN2 1154 aa18.02■□□□□ 0.48
SCFD1-224ENST00000557713 MFSD14AQ96MC6 490 aa18.02■□□□□ 0.48
SCFD1-224ENST00000557713 FBXL18Q96ME1 805 aa18.02■□□□□ 0.48
SCFD1-224ENST00000557713 PHF7Q9BWX1 381 aaPredicted RBP18.02■□□□□ 0.48
SCFD1-224ENST00000557713 SLC26A6Q9BXS9 759 aa18.02■□□□□ 0.48
SCFD1-224ENST00000557713 VPS54Q9P1Q0 977 aa18.02■□□□□ 0.48
SCFD1-224ENST00000557713 MYH9P35579 1960 aaKnown RBP18.02■□□□□ 0.47
SCFD1-224ENST00000557713 MUC6Q6W4X9 2439 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 FSD2A1L4K1 749 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 HOXA2O43364 376 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 ZSCAN20P17040 1043 aaPredicted RBP18.01■□□□□ 0.47
SCFD1-224ENST00000557713 ATF7P17544 494 aaPredicted RBP18.01■□□□□ 0.47
SCFD1-224ENST00000557713 GPC3P51654 580 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 PRKCEQ02156 737 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 UGCGQ16739 394 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 KCNT2Q6UVM3 1135 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 BMP8AQ7Z5Y6 402 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 ECHDC2Q86YB7 292 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 UNC45AQ9H3U1 944 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 SH3GLB2Q9NR46 395 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 PUF60Q9UHX1 559 aaKnown RBP18.01■□□□□ 0.47
SCFD1-224ENST00000557713 TRIOO75962 3097 aa18.01■□□□□ 0.47
SCFD1-224ENST00000557713 DARSP14868 501 aaKnown RBP18■□□□□ 0.47
SCFD1-224ENST00000557713 SFNP31947 248 aa18■□□□□ 0.47
SCFD1-224ENST00000557713 CCT2P78371 535 aaKnown RBP18■□□□□ 0.47
SCFD1-224ENST00000557713 NHLH1Q02575 133 aa18■□□□□ 0.47
SCFD1-224ENST00000557713 TARBP2Q15633 366 aaKnown RBP18■□□□□ 0.47
SCFD1-224ENST00000557713 TRIM67Q6ZTA4 783 aa18■□□□□ 0.47
SCFD1-224ENST00000557713 GJA10Q969M2 543 aa18■□□□□ 0.47
SCFD1-224ENST00000557713 ZNF668Q96K58 619 aaPredicted RBP18■□□□□ 0.47
SCFD1-224ENST00000557713 S1PR5Q9H228 398 aa18■□□□□ 0.47
SCFD1-224ENST00000557713 NCOA5Q9HCD5 579 aaKnown RBP18■□□□□ 0.47
SCFD1-224ENST00000557713 A0A0U1RQF3 1178 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 HIDE1A8MVS5 230 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 GAS7O60861 476 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 PSMD10O75832 226 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 EOMESO95936 686 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 PSMA5P28066 241 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 JAK3P52333 1124 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 NLRP5P59047 1200 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 ZXDAP98168 799 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 Q4G0T1 1027 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 CLLU1OSQ5K130 101 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 LRCH2Q5VUJ6 765 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 PLPP4Q5VZY2 271 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 B3GNT9Q6UX72 402 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 ZNF598Q86UK7 904 aaKnown RBP17.99■□□□□ 0.47
SCFD1-224ENST00000557713 LRRC43Q8N309 656 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 TBCKQ8TEA7 893 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 ZNF558Q96NG5 402 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 CEP89Q96ST8 783 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 TCF25Q9BQ70 676 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 TEKT3Q9BXF9 490 aa17.99■□□□□ 0.47
SCFD1-224ENST00000557713 NIFKQ9BYG3 293 aaKnown RBP17.99■□□□□ 0.47
SCFD1-224ENST00000557713 NGRNQ9NPE2 291 aaKnown RBP17.99■□□□□ 0.47
SCFD1-224ENST00000557713 WDR81Q562E7 1941 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 CYP3A7-CYP3A51PA0A087WV96 503 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 TMEM221A6NGB7 291 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 M0R296 226 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 CHMP2AO43633 222 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 STBD1O95210 358 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 FGFR4P22455 802 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 CYP3A7P24462 503 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 PBX3P40426 434 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 KRT17Q04695 432 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 TBC1D8BQ0IIM8 1120 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 DRP2Q13474 957 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 ANKRD54Q6NXT1 300 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 ABI1Q8IZP0 508 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 RDM1Q8NG50 284 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 RPGRIP1Q96KN7 1286 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 SPG21Q9NZD8 308 aa17.98■□□□□ 0.47
SCFD1-224ENST00000557713 IGKV6-21A0A0C4DH24 114 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 M0R2N6 131 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 PPM1AP35813 382 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 TECP42680 631 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 CDC42EP1Q00587 391 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 TOB2Q14106 344 aaPredicted RBP17.97■□□□□ 0.47
SCFD1-224ENST00000557713 XKR3Q5GH77 459 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 SYCE2Q6PIF2 218 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 SLC39A11Q8N1S5 342 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 RNF169Q8NCN4 708 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 C22orf23Q9BZE7 217 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 ENTPD7Q9NQZ7 604 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 PCDHA4Q9UN74 947 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 TECTAO75443 2155 aa17.97■□□□□ 0.47
SCFD1-224ENST00000557713 CSDE1O75534 798 aaKnown RBP17.96■□□□□ 0.47
SCFD1-224ENST00000557713 SRGAP2BP0DMP2 458 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 MRE11P49959 708 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 RUFY3Q7L099 469 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 MIER3Q7Z3K6 550 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 TMC7Q7Z402 723 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 MRPL43Q8N983 215 aaKnown RBP17.96■□□□□ 0.47
SCFD1-224ENST00000557713 HELQQ8TDG4 1101 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 NLRP7Q8WX94 980 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 PBXIP1Q96AQ6 731 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 MBOAT7Q96N66 472 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 TRAIPQ9BWF2 469 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 ZSWIM6Q9HCJ5 1215 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms