RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 DDX21Q9NR30 783 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATXN3-243ENST00000556671 SPATA6Q9NWH7 488 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-243ENST00000556671 HYPKQ9NX55 129 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 DBF4Q9UBU7 674 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-243ENST00000556671 LAMB2P55268 1798 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 SLX4Q8IY92 1834 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 ARFGEF1Q9Y6D6 1849 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 BRCA1P38398 1863 aaKnown RBP5.92□□□□□ -1.46
ATXN3-243ENST00000556671 E9PSI1 815 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 POLRMTO00411 1230 aaKnown RBP5.92□□□□□ -1.46
ATXN3-243ENST00000556671 SMAD7O15105 426 aaKnown RBP5.92□□□□□ -1.46
ATXN3-243ENST00000556671 C8BP07358 591 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 ZNF853P0CG23 659 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 KRTAP10-2P60368 255 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 E4F1Q66K89 784 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-243ENST00000556671 IQCEQ6IPM2 695 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 TEX2Q8IWB9 1127 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 FAM178BQ8IXR5 827 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 LINC00482Q8N8I6 264 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 CNBD1Q8NA66 436 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 BTN2A2Q8WVV5 523 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 CHMP4AQ9BY43 222 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 USP40Q9NVE5 1235 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 ACTR10Q9NZ32 417 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 MRVI1Q9Y6F6 885 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 MAP3K15Q6ZN16 1313 aa5.92□□□□□ -1.46
ATXN3-243ENST00000556671 SCN7AQ01118 1682 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 ERVV-1B6SEH8 477 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 C22orf46C9J442 243 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 SGSM2O43147 1006 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 TBX1O43435 398 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 NOBOXO60393 691 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 DDX58O95786 925 aaKnown RBP5.91□□□□□ -1.46
ATXN3-243ENST00000556671 CYP2C8P10632 490 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 YY1P25490 414 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 TGFB2P61812 414 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 NFKB2Q00653 900 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 TNNI3KQ59H18 835 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 DALRD3Q5D0E6 543 aaKnown RBP5.91□□□□□ -1.46
ATXN3-243ENST00000556671 CLEC4GQ6UXB4 293 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 PPP1R42Q7Z4L9 355 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 ZNF227Q86WZ6 799 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 MIB1Q86YT6 1006 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 RIOX2Q8IUF8 465 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 Q8N1Y9 231 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 SEC14L1Q92503 715 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 ZBTB8AQ96BR9 441 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 DDX11Q96FC9 970 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 MYD88Q99836 296 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 BDH2Q9BUT1 245 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 NYXQ9GZU5 481 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 AP5M1Q9H0R1 490 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 NTMQ9P121 344 aa5.91□□□□□ -1.46
ATXN3-243ENST00000556671 TRMT112Q9UI30 125 aaKnown RBP5.91□□□□□ -1.46
ATXN3-243ENST00000556671 DICER1Q9UPY3 1922 aaKnown RBP5.9□□□□□ -1.46
ATXN3-243ENST00000556671 B2RBV5 119 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 ARNTLO00327 626 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 SUSD5O60279 629 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 SCG5P05408 212 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 SSBP05455 408 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATXN3-243ENST00000556671 ITGAVP06756 1048 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 HOXC12P31275 282 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 SLC6A11P48066 632 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 SARSP49591 514 aaKnown RBP5.9□□□□□ -1.46
ATXN3-243ENST00000556671 RPL11P62913 178 aaKnown RBP5.9□□□□□ -1.46
ATXN3-243ENST00000556671 PLP2Q04941 152 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 EFEMP1Q12805 493 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 TCIRG1Q13488 830 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 TESK1Q15569 626 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 HSP90AB3PQ58FF7 597 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 SUSD4Q5VX71 490 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 LARP1BQ659C4 914 aaKnown RBP5.9□□□□□ -1.46
ATXN3-243ENST00000556671 PRR5LQ6MZQ0 368 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 ETV3LQ6ZN32 361 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 VPS37DQ86XT2 251 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 CCDC103Q8IW40 242 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 PLBD2Q8NHP8 589 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 RPGRQ92834 1020 aaKnown RBP5.9□□□□□ -1.46
ATXN3-243ENST00000556671 YTHDC1Q96MU7 727 aaKnown RBP5.9□□□□□ -1.46
ATXN3-243ENST00000556671 GORASP1Q9BQQ3 440 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 UTP14AQ9BVJ6 771 aaKnown RBP5.9□□□□□ -1.46
ATXN3-243ENST00000556671 PCDH18Q9HCL0 1135 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 PRKAG3Q9UGI9 489 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 TMEFF2Q9UIK5 374 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-243ENST00000556671 MAP3K2Q9Y2U5 619 aa5.9□□□□□ -1.46
ATXN3-243ENST00000556671 TIMM13Q9Y5L4 95 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-243ENST00000556671 IL16Q14005 1332 aa5.9□□□□□ -1.47
ATXN3-243ENST00000556671 FANCIQ9NVI1 1328 aa5.9□□□□□ -1.47
ATXN3-243ENST00000556671 CARMIL3Q8ND23 1372 aa5.9□□□□□ -1.47
ATXN3-243ENST00000556671 DLEC1Q9Y238 1755 aa5.9□□□□□ -1.47
ATXN3-243ENST00000556671 NRXN2Q9P2S2 1712 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 SMARCA5O60264 1052 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-243ENST00000556671 HOXB7P09629 217 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 FPR2P25090 351 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 ERCC5P28715 1186 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-243ENST00000556671 GTF2A2P52657 109 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 NEXNQ0ZGT2 675 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 KCNAB2Q13303 367 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 SMAD4Q13485 552 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms