RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 TMOD1P28289 359 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 GJB2P29033 226 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 YWHABP31946 246 aaKnown RBP9.08□□□□□ -0.96
VTI1B-206ENST00000556461 SARSP49591 514 aaKnown RBP9.08□□□□□ -0.96
VTI1B-206ENST00000556461 PAN2Q504Q3 1202 aaKnown RBP9.08□□□□□ -0.96
VTI1B-206ENST00000556461 EPC2Q52LR7 807 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 TTC38Q5R3I4 469 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 FAM102BQ5T8I3 360 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 NPAS4Q8IUM7 802 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 C4orf19Q8IY42 314 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 TMEM192Q8IY95 271 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 FBXO22Q8NEZ5 403 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 TMEM143Q96AN5 459 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 CEP170P1Q96L14 293 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 FDXACB1Q9BRP7 624 aaPredicted RBP9.08□□□□□ -0.96
VTI1B-206ENST00000556461 DHX33Q9H6R0 707 aaKnown RBP9.08□□□□□ -0.96
VTI1B-206ENST00000556461 ZSWIM4Q9H7M6 989 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 XPNPEP1Q9NQW7 623 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 RGS18Q9NS28 235 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 HCSTQ9UBK5 93 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 GTF3C3Q9Y5Q9 886 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 MRPL42Q9Y6G3 142 aaKnown RBP9.08□□□□□ -0.96
VTI1B-206ENST00000556461 MYO7AQ13402 2215 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 BRWD1Q9NSI6 2320 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 ADGRA3Q8IWK6 1321 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 GPR182O15218 404 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 MED24O75448 989 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 OR52Z1P0C646 297 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 SPATA31C1P0DKV0 1188 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 TECP42680 631 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 FAM189BP81408 668 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 BTG3Q14201 252 aaPredicted RBP9.07□□□□□ -0.96
VTI1B-206ENST00000556461 XKR9Q5GH70 373 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 RHPN2Q8IUC4 686 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 FIBCD1Q8N539 461 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 PIGOQ8TEQ8 1089 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 NLRP7Q8WX94 980 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 RNF19AQ9NV58 838 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 PCDHB6Q9Y5E3 794 aa9.07□□□□□ -0.96
VTI1B-206ENST00000556461 DENND3A2RUS2 1198 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 GTPBP6O43824 516 aaPredicted RBP9.06□□□□□ -0.96
VTI1B-206ENST00000556461 DKC1O60832 514 aaKnown RBP eCLIP9.06□□□□□ -0.96
VTI1B-206ENST00000556461 LYPLA2O95372 231 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 SRGAP2CP0DJJ0 459 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 FGFR1P11362 822 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 CTNNB1P35222 781 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 RARRES1P49788 294 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 POLGP54098 1239 aaPredicted RBP9.06□□□□□ -0.96
VTI1B-206ENST00000556461 GPM6BQ13491 265 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 GNL2Q13823 731 aaKnown RBP9.06□□□□□ -0.96
VTI1B-206ENST00000556461 EMC2Q15006 297 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 IL17AQ16552 155 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 ECM1Q16610 540 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 SLC24A5Q71RS6 500 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 CATSPER3Q86XQ3 398 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 ASAP3Q8TDY4 903 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 PRPF31Q8WWY3 499 aaKnown RBP9.06□□□□□ -0.96
VTI1B-206ENST00000556461 CLP1Q92989 425 aaKnown RBP9.06□□□□□ -0.96
VTI1B-206ENST00000556461 NLRP4Q96MN2 994 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 SCLT1Q96NL6 688 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 MINDY3Q9H8M7 445 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 IFT122Q9HBG6 1241 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 PCDHB7Q9Y5E2 793 aa9.06□□□□□ -0.96
VTI1B-206ENST00000556461 BDP1A6H8Y1 2624 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 TBKBP1A7MCY6 615 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 H3BNC9 293 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 GRM6O15303 877 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 CSPG5O95196 566 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 STAG3L1P0CL83 205 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 ATF7P17544 494 aaPredicted RBP9.05□□□□□ -0.96
VTI1B-206ENST00000556461 BMPR1AP36894 532 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 RFC5P40937 340 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 TRAPPC10P48553 1259 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 MCM2P49736 904 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 DNM2P50570 870 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 TFF2Q03403 129 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 LAMTOR4Q0VGL1 99 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 PTGDRQ13258 359 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 CUL4AQ13619 759 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 SKIV2LQ15477 1246 aaKnown RBP9.05□□□□□ -0.96
VTI1B-206ENST00000556461 MCTP1Q6DN14 999 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 POTEGQ6S5H5 508 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 OTUD6AQ7L8S5 288 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 ECHDC2Q86YB7 292 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 CMTR2Q8IYT2 770 aaKnown RBP9.05□□□□□ -0.96
VTI1B-206ENST00000556461 NEK9Q8TD19 979 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 SLC7A3Q8WY07 619 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 SAMD11Q96NU1 681 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 COL25A1Q9BXS0 654 aaPredicted RBP9.05□□□□□ -0.96
VTI1B-206ENST00000556461 GCOM2Q9BZD3 368 aaPredicted RBP9.05□□□□□ -0.96
VTI1B-206ENST00000556461 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.05□□□□□ -0.96
VTI1B-206ENST00000556461 C1orf112Q9NSG2 853 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 ANKEF1Q9NU02 776 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 LRFN2Q9ULH4 789 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 NOL7Q9UMY1 257 aaKnown RBP9.05□□□□□ -0.96
VTI1B-206ENST00000556461 SMC3Q9UQE7 1217 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 COL4A3BPQ9Y5P4 624 aa9.05□□□□□ -0.96
VTI1B-206ENST00000556461 MEIS3P2A8K0S8 358 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 PP2D1A8MPX8 630 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 C5orf67F2Z3F1 127 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms