RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 TMOD4Q9NZQ9 345 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 R3HCC1Q9Y3T6 440 aaKnown RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 SSC5DA1L4H1 1573 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 PPP1R12BO60237 982 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 COBLO75128 1261 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 STAM2O75886 525 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 DDNO94850 711 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 ARHGEF15O94989 841 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 GYPCP04921 128 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 SSBP05455 408 aaKnown RBP eCLIP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 KRT18P05783 430 aaKnown RBP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 TNNT1P13805 278 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 GTF2F1P35269 517 aaKnown RBP eCLIP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 ADKP55263 362 aaKnown RBP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 MRPS9P82933 396 aaKnown RBP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 MUM1L1Q5H9M0 696 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 PRAMEF18Q5VWM3 479 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 RINT1Q6NUQ1 792 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 LRRC55Q6ZSA7 311 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 C1orf186Q6ZWK4 172 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 USP50Q70EL3 339 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 VSIG10LQ86VR7 867 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 TMTC1Q8IUR5 882 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 MYRIPQ8NFW9 859 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 RDM1Q8NG50 284 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 SCFD1Q8WVM8 642 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 HPS3Q969F9 1004 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 ATG4CQ96DT6 458 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 PPP1R13BQ96KQ4 1090 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 CNOT6LQ96LI5 555 aaKnown RBP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 SENP7Q9BQF6 1050 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 TEX13BQ9BXU2 312 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 KCTD10Q9H3F6 313 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 OLFML3Q9NRN5 406 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 RGL1Q9NZL6 768 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 SEL1LQ9UBV2 794 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 ZNF214Q9UL59 606 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 CAPN11Q9UMQ6 739 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 TRAF3IP3Q9Y228 551 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 COL4A3BPQ9Y5P4 624 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 SNCAIPQ9Y6H5 919 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 DICER1Q9UPY3 1922 aaKnown RBP9.17□□□□□ -0.94
ATXN3-235ENST00000556082 DOCK1Q14185 1865 aa9.17□□□□□ -0.94
ATXN3-235ENST00000556082 A0A1W2PQJ5 194 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 USP27XA6NNY8 438 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 SPATA31C2B4DYI2 1134 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 PDXKO00764 312 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 CXCL11O14625 94 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 GNRH1P01148 92 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 P4HBP07237 508 aaKnown RBP9.16□□□□□ -0.94
ATXN3-235ENST00000556082 GUCY2CP25092 1073 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 CASP14P31944 242 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 ZNF131P52739 623 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 HMGCS2P54868 508 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 CDK17Q00537 523 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 PPATQ06203 517 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 TBC1D8BQ0IIM8 1120 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 PABPC4Q13310 644 aaKnown RBP eCLIP9.16□□□□□ -0.94
ATXN3-235ENST00000556082 PGM5Q15124 567 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 MAN2A1Q16706 1144 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 VWA3BQ502W6 1294 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 MIIPQ5JXC2 388 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 FKBP15Q5T1M5 1219 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 CEP135Q66GS9 1140 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 LBX2Q6XYB7 198 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 TPH2Q8IWU9 490 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 CHST13Q8NET6 341 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 OR8K1Q8NGG5 319 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 GPRASP2Q96D09 838 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 DYDC2Q96IM9 177 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 TAAR1Q96RJ0 339 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 RMDN3Q96TC7 470 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 DNAJC7Q99615 494 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 REEP2Q9BRK0 252 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 PDCD2LQ9BRP1 358 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 EDEM3Q9BZQ6 932 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 BHMT2Q9H2M3 363 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 UNC45AQ9H3U1 944 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 ZSWIM4Q9H7M6 989 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 PXMP2Q9NR77 195 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 RNF146Q9NTX7 359 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 RNF181Q9P0P0 153 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 DBR1Q9UK59 544 aaKnown RBP9.16□□□□□ -0.94
ATXN3-235ENST00000556082 ODF2LQ9ULJ1 636 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 ATAD5Q96QE3 1844 aa9.16□□□□□ -0.94
ATXN3-235ENST00000556082 UBE4BO95155 1302 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 NPHP3-ACAD11A0A0J9YXS1 232 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 UNCXA6NJT0 531 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 EIF3DO15371 548 aaKnown RBP eCLIP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 TBCAO75347 108 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 MAPTP10636 758 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 HNRNPH3P31942 346 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 SFNP31947 248 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 MTIF2P46199 727 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 IREB2P48200 963 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 FXR1P51114 621 aaKnown RBP eCLIP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 JAK3P52333 1124 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 UBXN2AP68543 259 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 CYP4A11Q02928 519 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms