RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 DSC3Q14574 896 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 EPHA7Q15375 998 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 ECM1Q16610 540 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 LETM2Q2VYF4 491 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 UVSSAQ2YD98 709 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 HYIQ5T013 277 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 FAM160B1Q5W0V3 765 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 RTN4RL1Q86UN2 441 aaPredicted RBP4.38□□□□□ -1.71
LINC00648-202ENST00000555985 SLFN12Q8IYM2 578 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 RPUSD2Q8IZ73 545 aaKnown RBP4.38□□□□□ -1.71
LINC00648-202ENST00000555985 TRAPPC12Q8WVT3 735 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 KCNN1Q92952 543 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 ZNF689Q96CS4 500 aaPredicted RBP4.38□□□□□ -1.71
LINC00648-202ENST00000555985 C8orf76Q96K31 380 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 TMX1Q9H3N1 280 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 DHX33Q9H6R0 707 aaKnown RBP4.38□□□□□ -1.71
LINC00648-202ENST00000555985 TTC12Q9H892 705 aaPredicted RBP4.38□□□□□ -1.71
LINC00648-202ENST00000555985 SLC24A3Q9HC58 644 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 GABBR1Q9UBS5 961 aa4.38□□□□□ -1.71
LINC00648-202ENST00000555985 FEZ2Q9UHY8 353 aaPredicted RBP4.38□□□□□ -1.71
LINC00648-202ENST00000555985 YBX2Q9Y2T7 364 aaKnown RBP4.38□□□□□ -1.71
LINC00648-202ENST00000555985 ABHD14A-ACY1A0A1B0GW23 586 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 RSPH10B2B2RC85 870 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 CLGNO14967 610 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 GAS7O60861 476 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 PPP1R37O75864 691 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 ARHGEF15O94989 841 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 FGBP02675 491 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 RSPH10BP0C881 870 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 MUTP22033 750 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 ZNF76P36508 570 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 TTC3P53804 2025 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 FAM189BP81408 668 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 PRKCEQ02156 737 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 PDCD11Q14690 1871 aaKnown RBP4.37□□□□□ -1.71
LINC00648-202ENST00000555985 CREBRFQ8IUR6 639 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 TMEM40Q8WWA1 233 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 APBB2Q92870 758 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 VTI1AQ96AJ9 217 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 FAM167AQ96KS9 214 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 MMTAG2Q9BU76 263 aaKnown RBP4.37□□□□□ -1.71
LINC00648-202ENST00000555985 POLR3CQ9BUI4 534 aaPredicted RBP4.37□□□□□ -1.71
LINC00648-202ENST00000555985 PBX4Q9BYU1 374 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 TSPY26PQ9H489 355 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 CDHR5Q9HBB8 845 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 PLXNA4Q9HCM2 1894 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 ERVK-5Q9HDB9 667 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 MTMR10Q9NXD2 777 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.37□□□□□ -1.71
LINC00648-202ENST00000555985 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.37□□□□□ -1.71
LINC00648-202ENST00000555985 DDX39AO00148 427 aaKnown RBP4.37□□□□□ -1.71
LINC00648-202ENST00000555985 NEMFO60524 1076 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 MBD3O95983 291 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 P4HBP07237 508 aaKnown RBP4.37□□□□□ -1.71
LINC00648-202ENST00000555985 MARK3P27448 753 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 PBX2P40425 430 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 PSMC5P62195 406 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 ATP2C1P98194 919 aaPredicted RBP4.37□□□□□ -1.71
LINC00648-202ENST00000555985 RESTQ13127 1097 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 XKR3Q5GH77 459 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 FAM47CQ5HY64 1035 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 PDXDC2PQ6P474 469 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 TSHZ1Q6ZSZ6 1077 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 KIAA1524Q8TCG1 905 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 NEK9Q8TD19 979 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 RNPC3Q96LT9 517 aaKnown RBP4.37□□□□□ -1.71
LINC00648-202ENST00000555985 SLC9A7Q96T83 725 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 TRAIPQ9BWF2 469 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 AGO3Q9H9G7 860 aaKnown RBP4.37□□□□□ -1.71
LINC00648-202ENST00000555985 PCDHB6Q9Y5E3 794 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 PCDHA11Q9Y5I1 949 aa4.37□□□□□ -1.71
LINC00648-202ENST00000555985 TMEM150BA6NC51 233 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 LAD1O00515 517 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 ZBTB39O15060 712 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 EFCAB14O75071 495 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 KLRC1P26715 233 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 THPOP40225 353 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 QARSP47897 775 aaKnown RBP4.36□□□□□ -1.71
LINC00648-202ENST00000555985 DEFB103AP81534 67 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 SP4Q02446 784 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 DRP2Q13474 957 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 PKP1Q13835 747 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 PDIA5Q14554 519 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 PTPAQ15257 358 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 CALCRLQ16602 461 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 FOXD4L5Q5VV16 416 aaPredicted RBP4.36□□□□□ -1.71
LINC00648-202ENST00000555985 MIER3Q7Z3K6 550 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 KRT222Q8N1A0 295 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 USP38Q8NB14 1042 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 FAM184AQ8NB25 1140 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 RETREG2Q8NC44 543 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 KIF18AQ8NI77 898 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 LRRC15Q8TF66 581 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 DNAJB3Q8WWF6 145 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 FOXD4L4Q8WXT5 416 aaPredicted RBP4.36□□□□□ -1.71
LINC00648-202ENST00000555985 GLG1Q92896 1179 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 UIMC1Q96RL1 719 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 EIF2AK1Q9BQI3 630 aaKnown RBP4.36□□□□□ -1.71
LINC00648-202ENST00000555985 NFKBIZQ9BYH8 718 aa4.36□□□□□ -1.71
LINC00648-202ENST00000555985 CELF4Q9BZC1 486 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms