RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 FAM84BQ96KN1 310 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 C9orf72Q96LT7 481 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 ZNF317Q96PQ6 595 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-217ENST00000555022 PKD1L3Q7Z443 1732 aa9.61□□□□□ -0.87
SYNE2-217ENST00000555022 CETN3O15182 167 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 GCNT3O95395 438 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 LINGO3P0C6S8 592 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 ATP2A2P16615 1042 aaKnown RBP9.6□□□□□ -0.87
SYNE2-217ENST00000555022 RANBP1P43487 201 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 DNAJC3Q13217 504 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 KYNUQ16719 465 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 FIGNQ5HY92 759 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 ZNF662Q6ZS27 426 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 NSUN4Q96CB9 384 aaKnown RBP9.6□□□□□ -0.87
SYNE2-217ENST00000555022 RPS6KC1Q96S38 1066 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 KDM4CQ9H3R0 1056 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 SLCO1B3Q9NPD5 702 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 DLGAP2Q9P1A6 1054 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 FBXO3Q9UK99 471 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 FAM196BA6NMK8 535 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 EPHB2P29323 1055 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 ZNF131P52739 623 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 UBXN2AP68543 259 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 USP4Q13107 963 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 TMED2Q15363 201 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 ZC2HC1CQ53FD0 456 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-217ENST00000555022 AGBL2Q5U5Z8 902 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 KCTD1Q719H9 257 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 SCFD1Q8WVM8 642 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 TGS1Q96RS0 853 aaKnown RBP9.6□□□□□ -0.87
SYNE2-217ENST00000555022 CRAMP1Q96RY5 1269 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 PLA2G12BQ9BX93 195 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 HEMGNQ9BXL5 484 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 DCTN4Q9UJW0 460 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 ZBTB39O15060 712 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 FLOT1O75955 427 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 CYP19A1P11511 503 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-217ENST00000555022 MPP2Q14168 576 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 MDH1BQ5I0G3 518 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 MIS18BP1Q6P0N0 1132 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 TTC27Q6P3X3 843 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 INTS8Q75QN2 995 aaKnown RBP9.6□□□□□ -0.87
SYNE2-217ENST00000555022 KRT25Q7Z3Z0 450 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 PIGOQ8TEQ8 1089 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 HOOK2Q96ED9 719 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 TSC22D3Q99576 134 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 EPB41L4BQ9H329 900 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 PICK1Q9NRD5 415 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 RNF14Q9UBS8 474 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 SERPINA10Q9UK55 444 aa9.6□□□□□ -0.87
SYNE2-217ENST00000555022 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.6□□□□□ -0.87
SYNE2-217ENST00000555022 USP15Q9Y4E8 981 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-217ENST00000555022 COL1A1P02452 1464 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-217ENST00000555022 A0A1W2PRG0 241 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 ERVV-2B6SEH9 535 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 POC1B-GALNT4F8VUJ3 575 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 HIP1RO75146 1068 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 AKAP3O75969 853 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 PYGLP06737 847 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 PLA2G4BP0C869 781 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 CHKAP35790 457 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 OVGP1Q12889 678 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 CCDC6Q16204 474 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 EPC2Q52LR7 807 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 IRF2BP2Q7Z5L9 587 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 NT5DC3Q86UY8 548 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 C4orf33Q8N1A6 199 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 LRRC57Q8N9N7 239 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 C3orf20Q8ND61 904 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 LNX1Q8TBB1 728 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-217ENST00000555022 NUDCD1Q96RS6 583 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 EYA3Q99504 573 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 KLF6Q99612 283 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-217ENST00000555022 NSRP1Q9H0G5 558 aaKnown RBP9.59□□□□□ -0.87
SYNE2-217ENST00000555022 GANQ9H2C0 597 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.87
SYNE2-217ENST00000555022 USH1CQ9Y6N9 552 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 SNX3O60493 162 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 LCA5LO95447 670 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 UBTFL6P0CB48 400 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-217ENST00000555022 XRCC5P13010 732 aaKnown RBP9.59□□□□□ -0.87
SYNE2-217ENST00000555022 BRAFP15056 766 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 PON1P27169 355 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 CPA2P48052 419 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 COPS2P61201 443 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 IRX1P78414 480 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-217ENST00000555022 CNGA2Q16280 664 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 GRIPAP1Q4V328 841 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 KIAA1755Q5JYT7 1200 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 LLGL2Q6P1M3 1020 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 TMEM154Q6P9G4 183 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 SPATA21Q7Z572 469 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 EXOC3L1Q86VI1 746 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 CYP4X1Q8N118 509 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 CEP95Q96GE4 821 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 L3MBTL3Q96JM7 780 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-217ENST00000555022 PBKQ96KB5 322 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 ERP44Q9BS26 406 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 PCIF1Q9H4Z3 704 aa9.59□□□□□ -0.87
SYNE2-217ENST00000555022 KLHL11Q9NVR0 708 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms