RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MKL1Q969V6 931 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 ALPK1Q96QP1 1244 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 TRIT1Q9H3H1 467 aaKnown RBP6.06□□□□□ -1.44
ATXN3-228ENST00000554592 SP110Q9HB58 689 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 OGDHLQ9ULD0 1010 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 ZNF281Q9Y2X9 895 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 A0A0C4DFX4 3053 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 PSME4Q14997 1843 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 RANBP2P49792 3224 aaKnown RBP6.06□□□□□ -1.44
ATXN3-228ENST00000554592 DLG5Q8TDM6 1919 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 MAST3O60307 1309 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 MROH5Q6ZUA9 1318 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 FAM86C2PA6NEL3 165 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 HMGCRP04035 888 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 RAG1P15918 1043 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 CCNFP41002 786 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 TCP10Q12799 353 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 FXNQ16595 210 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 DDR2Q16832 855 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 EPHA10Q5JZY3 1008 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 BEND3Q5T5X7 828 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 GADL1Q6ZQY3 521 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 CREG2Q8IUH2 290 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 TMEM192Q8IY95 271 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 GUCD1Q96NT3 240 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATXN3-228ENST00000554592 GPATCH2Q9NW75 528 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 C9orf78Q9NZ63 289 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-228ENST00000554592 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATXN3-228ENST00000554592 GJD2Q9UKL4 321 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 MSRB2Q9Y3D2 182 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 AFG3L2Q9Y4W6 797 aa6.05□□□□□ -1.44
ATXN3-228ENST00000554592 RPAP1Q9BWH6 1393 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-228ENST00000554592 FAM221BA6H8Z2 402 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 GRM8O00222 908 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 SMARCA5O60264 1052 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-228ENST00000554592 AFMP43652 599 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 GCLCP48506 637 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-228ENST00000554592 FAM110CQ1W6H9 321 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 CDC42EP5Q6NZY7 148 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 ZSWIM9Q86XI8 627 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 SCYL3Q8IZE3 742 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 ANKRD13CQ8N6S4 541 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 WDR66Q8TBY9 1149 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 PUS3Q9BZE2 481 aaKnown RBP6.04□□□□□ -1.44
ATXN3-228ENST00000554592 ADAMTS10Q9H324 1103 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 USP40Q9NVE5 1235 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 SLAMF8Q9P0V8 285 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 DUSP13Q9UII6 198 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 TMEM59LQ9UK28 342 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 PCDHA11Q9Y5I1 949 aa6.04□□□□□ -1.44
ATXN3-228ENST00000554592 LRRFIP2Q9Y608 721 aaKnown RBP6.04□□□□□ -1.44
ATXN3-228ENST00000554592 B2RBV5 119 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 CTNND1O60716 968 aaKnown RBP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 PDE8BO95263 885 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 GJB6O95452 261 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 COL6A1P12109 1028 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 ERVFC1P60507 584 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 PABPC4Q13310 644 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 SNW1Q13573 536 aaKnown RBP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 METTL24Q5JXM2 366 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 C6orf15Q6UXA7 325 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 ZFPM1Q8IX07 1006 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 ENOX1Q8TC92 643 aaKnown RBP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 TSR2Q969E8 191 aaKnown RBP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 DEPDC7Q96QD5 511 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 SRPK1Q96SB4 655 aaKnown RBP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 CDX2Q99626 313 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 LBHD1Q9BQE6 289 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 HDAC8Q9BY41 377 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 CCDC113Q9H0I3 377 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 SNTG2Q9NY99 539 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 EBF1Q9UH73 591 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 PCDHB10Q9UN67 800 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 AGTPBP1Q9UPW5 1226 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 SLC12A7Q9Y666 1083 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 ZNF646O15015 1829 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-228ENST00000554592 CUL9Q8IWT3 2517 aa6.03□□□□□ -1.44
ATXN3-228ENST00000554592 COL6A3P12111 3177 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 TRIM75PA6NK02 468 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 ENTPD3O75355 529 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 VAMP4O75379 141 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 ALDH1L1O75891 902 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 HPXP02790 462 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 IFIT1P09914 478 aaKnown RBP6.02□□□□□ -1.45
ATXN3-228ENST00000554592 ZGLP1P0C6A0 271 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 RNF4P78317 190 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 TEKQ02763 1124 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 EGR3Q06889 387 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 MESP2Q0VG99 397 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 FZD5Q13467 585 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 MAP3K21Q5TCX8 1036 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 TMC3Q7Z5M5 1100 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 FAM178BQ8IXR5 827 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 MAFAQ8NHW3 353 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-228ENST00000554592 MRFAP1L1Q96HT8 127 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 IDI2Q9BXS1 227 aa6.02□□□□□ -1.45
ATXN3-228ENST00000554592 ZNF214Q9UL59 606 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-228ENST00000554592 PFASO15067 1338 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms