RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 CLIC4Q9Y696 253 aa31.64■■■□□ 2.66
PCNX1-206ENST00000554292 PP2D1A8MPX8 630 aa31.63■■■□□ 2.65
PCNX1-206ENST00000554292 ASAP2O43150 1006 aa31.63■■■□□ 2.65
PCNX1-206ENST00000554292 SLC26A4O43511 780 aa31.63■■■□□ 2.65
PCNX1-206ENST00000554292 LONP1P36776 959 aaKnown RBP31.63■■■□□ 2.65
PCNX1-206ENST00000554292 NFX1Q12986 1120 aaKnown RBP31.63■■■□□ 2.65
PCNX1-206ENST00000554292 ZNF697Q5TEC3 545 aa31.63■■■□□ 2.65
PCNX1-206ENST00000554292 MYOCDQ8IZQ8 938 aa31.63■■■□□ 2.65
PCNX1-206ENST00000554292 TMEM143Q96AN5 459 aa31.63■■■□□ 2.65
PCNX1-206ENST00000554292 TIFAQ96CG3 184 aa31.63■■■□□ 2.65
PCNX1-206ENST00000554292 ZBED2Q9BTP6 218 aa31.63■■■□□ 2.65
PCNX1-206ENST00000554292 INO80BQ9C086 356 aaPredicted RBP31.63■■■□□ 2.65
PCNX1-206ENST00000554292 NT5C3AQ9H0P0 336 aa31.63■■■□□ 2.65
PCNX1-206ENST00000554292 ERVK-5Q9HDB9 667 aa31.63■■■□□ 2.65
PCNX1-206ENST00000554292 USO1O60763 962 aaKnown RBP31.62■■■□□ 2.65
PCNX1-206ENST00000554292 F13A1P00488 732 aa31.62■■■□□ 2.65
PCNX1-206ENST00000554292 DARSP14868 501 aaKnown RBP31.62■■■□□ 2.65
PCNX1-206ENST00000554292 MXD4Q14582 209 aaPredicted RBP31.62■■■□□ 2.65
PCNX1-206ENST00000554292 MCPH1Q8NEM0 835 aa31.62■■■□□ 2.65
PCNX1-206ENST00000554292 CDK5RAP3Q96JB5 506 aa31.62■■■□□ 2.65
PCNX1-206ENST00000554292 DNM3Q9UQ16 869 aa31.62■■■□□ 2.65
PCNX1-206ENST00000554292 TTC3P53804 2025 aa31.61■■■□□ 2.65
PCNX1-206ENST00000554292 CDC25AP30304 524 aa31.61■■■□□ 2.65
PCNX1-206ENST00000554292 PTPAQ15257 358 aa31.61■■■□□ 2.65
PCNX1-206ENST00000554292 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.61■■■□□ 2.65
PCNX1-206ENST00000554292 FAM228AQ86W67 206 aa31.61■■■□□ 2.65
PCNX1-206ENST00000554292 NLRP4Q96MN2 994 aa31.61■■■□□ 2.65
PCNX1-206ENST00000554292 XPNPEP1Q9NQW7 623 aa31.61■■■□□ 2.65
PCNX1-206ENST00000554292 ST3GAL5Q9UNP4 418 aa31.61■■■□□ 2.65
PCNX1-206ENST00000554292 MORC2Q9Y6X9 1032 aaPredicted RBP31.61■■■□□ 2.65
PCNX1-206ENST00000554292 A0A087WWV3 80 aa31.6■■■□□ 2.65
PCNX1-206ENST00000554292 LOC101059915A0A1B0GWI6 518 aaPredicted RBP31.6■■■□□ 2.65
PCNX1-206ENST00000554292 UBA7P41226 1012 aa31.6■■■□□ 2.65
PCNX1-206ENST00000554292 CEBPZQ03701 1054 aaKnown RBP31.6■■■□□ 2.65
PCNX1-206ENST00000554292 ECM1Q16610 540 aa31.6■■■□□ 2.65
PCNX1-206ENST00000554292 HYIQ5T013 277 aa31.6■■■□□ 2.65
PCNX1-206ENST00000554292 PRPF31Q8WWY3 499 aaKnown RBP31.6■■■□□ 2.65
PCNX1-206ENST00000554292 ZNF668Q96K58 619 aaPredicted RBP31.6■■■□□ 2.65
PCNX1-206ENST00000554292 USP28Q96RU2 1077 aa31.6■■■□□ 2.65
PCNX1-206ENST00000554292 MMTAG2Q9BU76 263 aaKnown RBP31.6■■■□□ 2.65
PCNX1-206ENST00000554292 A0A087WZ62 844 aa31.59■■■□□ 2.65
PCNX1-206ENST00000554292 TLL1O43897 1013 aa31.59■■■□□ 2.65
PCNX1-206ENST00000554292 GJB5O95377 273 aa31.59■■■□□ 2.65
PCNX1-206ENST00000554292 PBX2P40425 430 aa31.59■■■□□ 2.65
PCNX1-206ENST00000554292 RABGGTBP53611 331 aa31.59■■■□□ 2.65
PCNX1-206ENST00000554292 LAMTOR4Q0VGL1 99 aa31.59■■■□□ 2.65
PCNX1-206ENST00000554292 FOXD4L5Q5VV16 416 aaPredicted RBP31.59■■■□□ 2.65
PCNX1-206ENST00000554292 PADI6Q6TGC4 694 aa31.59■■■□□ 2.65
PCNX1-206ENST00000554292 CABP7Q86V35 215 aa31.59■■■□□ 2.65
PCNX1-206ENST00000554292 FOXD4L4Q8WXT5 416 aaPredicted RBP31.59■■■□□ 2.65
PCNX1-206ENST00000554292 FDXACB1Q9BRP7 624 aaPredicted RBP31.59■■■□□ 2.65
PCNX1-206ENST00000554292 BHMT2Q9H2M3 363 aa31.59■■■□□ 2.65
PCNX1-206ENST00000554292 RNF216Q9NWF9 866 aaPredicted RBP31.59■■■□□ 2.65
PCNX1-206ENST00000554292 LAMA2P24043 3122 aaKnown RBP31.59■■■□□ 2.65
PCNX1-206ENST00000554292 ENPP3O14638 875 aa31.58■■■□□ 2.65
PCNX1-206ENST00000554292 EYA4O95677 639 aa31.58■■■□□ 2.65
PCNX1-206ENST00000554292 SFPQP23246 707 aaKnown RBP eCLIP31.58■■■□□ 2.65
PCNX1-206ENST00000554292 TFDP1Q14186 410 aa31.58■■■□□ 2.65
PCNX1-206ENST00000554292 ZRSR1Q15695 479 aaKnown RBP31.58■■■□□ 2.65
PCNX1-206ENST00000554292 CALML4Q96GE6 196 aa31.58■■■□□ 2.65
PCNX1-206ENST00000554292 TSPYL2Q9H2G4 693 aaPredicted RBP31.58■■■□□ 2.65
PCNX1-206ENST00000554292 DENND3A2RUS2 1198 aa31.57■■■□□ 2.64
PCNX1-206ENST00000554292 NASPP49321 788 aaPredicted RBP31.57■■■□□ 2.64
PCNX1-206ENST00000554292 SLC39A14Q15043 492 aa31.57■■■□□ 2.64
PCNX1-206ENST00000554292 STK38Q15208 465 aa31.57■■■□□ 2.64
PCNX1-206ENST00000554292 KSR1Q8IVT5 923 aa31.57■■■□□ 2.64
PCNX1-206ENST00000554292 TOP1MTQ969P6 601 aa31.57■■■□□ 2.64
PCNX1-206ENST00000554292 RAD9AQ99638 391 aa31.57■■■□□ 2.64
PCNX1-206ENST00000554292 SLC28A3Q9HAS3 691 aa31.57■■■□□ 2.64
PCNX1-206ENST00000554292 C1orf112Q9NSG2 853 aa31.57■■■□□ 2.64
PCNX1-206ENST00000554292 SRPRBQ9Y5M8 271 aaKnown RBP31.57■■■□□ 2.64
PCNX1-206ENST00000554292 CYP11B2P19099 503 aa31.56■■■□□ 2.64
PCNX1-206ENST00000554292 MARCKSP29966 332 aaPredicted RBP31.56■■■□□ 2.64
PCNX1-206ENST00000554292 PHKA2P46019 1235 aa31.56■■■□□ 2.64
PCNX1-206ENST00000554292 ATL3Q6DD88 541 aa31.56■■■□□ 2.64
PCNX1-206ENST00000554292 SRGAP1Q7Z6B7 1085 aa31.56■■■□□ 2.64
PCNX1-206ENST00000554292 DEFB123Q8N688 67 aa31.56■■■□□ 2.64
PCNX1-206ENST00000554292 RASSF8Q8NHQ8 419 aa31.56■■■□□ 2.64
PCNX1-206ENST00000554292 POLR3FQ9H1D9 316 aaPredicted RBP31.56■■■□□ 2.64
PCNX1-206ENST00000554292 NKX2-4Q9H2Z4 354 aa31.56■■■□□ 2.64
PCNX1-206ENST00000554292 TMX1Q9H3N1 280 aa31.56■■■□□ 2.64
PCNX1-206ENST00000554292 YBX2Q9Y2T7 364 aaKnown RBP31.56■■■□□ 2.64
PCNX1-206ENST00000554292 MYO9BQ13459 2157 aa31.56■■■□□ 2.64
PCNX1-206ENST00000554292 SRGAP2CP0DJJ0 459 aa31.55■■■□□ 2.64
PCNX1-206ENST00000554292 ARL2P36404 184 aa31.55■■■□□ 2.64
PCNX1-206ENST00000554292 FAM117BQ6P1L5 589 aa31.55■■■□□ 2.64
PCNX1-206ENST00000554292 RNF149Q8NC42 400 aa31.55■■■□□ 2.64
PCNX1-206ENST00000554292 LINC01599Q8WXQ3 324 aa31.55■■■□□ 2.64
PCNX1-206ENST00000554292 FBXO2Q9UK22 296 aaPredicted RBP31.55■■■□□ 2.64
PCNX1-206ENST00000554292 INSL6Q9Y581 213 aa31.55■■■□□ 2.64
PCNX1-206ENST00000554292 E9PMD0 336 aa31.54■■■□□ 2.64
PCNX1-206ENST00000554292 ZSCAN20P17040 1043 aaPredicted RBP31.54■■■□□ 2.64
PCNX1-206ENST00000554292 POU5F1BQ06416 359 aa31.54■■■□□ 2.64
PCNX1-206ENST00000554292 GRB10Q13322 594 aa31.54■■■□□ 2.64
PCNX1-206ENST00000554292 PKP1Q13835 747 aa31.54■■■□□ 2.64
PCNX1-206ENST00000554292 TMCO2Q7Z6W1 182 aaPredicted RBP31.54■■■□□ 2.64
PCNX1-206ENST00000554292 ADAM2Q99965 735 aa31.54■■■□□ 2.64
PCNX1-206ENST00000554292 IFT122Q9HBG6 1241 aa31.54■■■□□ 2.64
PCNX1-206ENST00000554292 RBAK-RBAKDNI3L0D1 243 aa31.53■■■□□ 2.64
PCNX1-206ENST00000554292 UPP2O95045 317 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms