RNA–Protein interactions for RNA: ENST00000554078.1

AC004858.1-201, humanhuman

BASIC

Gene AC004858.1, Length 242 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004858.1-201ENST00000554078 TRIM29Q14134 588 aa11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 SLFN12Q8IYM2 578 aa11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 KLHL23Q8NBE8 558 aa11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 SPPL3Q8TCT6 385 aa11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 TNFRSF25Q93038 417 aa11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 PABPC5Q96DU9 382 aaKnown RBP11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 SCLT1Q96NL6 688 aa11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 GCOM2Q9BZD3 368 aaPredicted RBP11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 SUCLA2Q9P2R7 463 aaPredicted RBP11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 LIMCH1Q9UPQ0 1083 aa11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 PCDHB12Q9Y5F1 795 aa11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 MICAL3Q7RTP6 2002 aa11.12□□□□□ -0.63
AC004858.1-201ENST00000554078 FAM205CA6NFA0 338 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 JAK2O60674 1132 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 CSDE1O75534 798 aaKnown RBP11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 MMP1P03956 469 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 ITGB1P05556 798 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 CAMK1Q14012 370 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 COL19A1Q14993 1142 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 EPHA7Q15375 998 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 SPOUT1Q5T280 376 aaKnown RBP11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 EP400NLQ6ZTU2 488 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 OTUD6AQ7L8S5 288 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 POTEDQ86YR6 584 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 EXOC8Q8IYI6 725 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 NEK9Q8TD19 979 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 JPH2Q9BR39 696 aaPredicted RBP11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 CYP26B1Q9NR63 512 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 CHST12Q9NRB3 414 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 AAASQ9NRG9 546 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 TYW1Q9NV66 732 aaKnown RBP11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 PCDHA12Q9UN75 941 aa11.11□□□□□ -0.63
AC004858.1-201ENST00000554078 TTC3P53804 2025 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 A0A087WZ62 844 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 A0A0U1RQF3 1178 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 GRXCR2A6NFK2 248 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 H3BQ06 376 aaPredicted RBP11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 HOXA2O43364 376 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 SLITRK3O94933 977 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 EOMESO95936 686 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 FGFR1P11362 822 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 FGFR4P22455 802 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 DNAJB1P25685 340 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 NPEPPSP55786 919 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 HYAL1Q12794 435 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 CTC1Q2NKJ3 1217 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 PLA2G4FQ68DD2 849 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 NCAPH2Q6IBW4 605 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 PTCRAQ6ISU1 281 aaPredicted RBP11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 ZNF410Q86VK4 478 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 ECHDC2Q86YB7 292 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 RHPN2Q8IUC4 686 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 C4orf19Q8IY42 314 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 DIS3L2Q8IYB7 885 aaKnown RBP11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 SLC7A3Q8WY07 619 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 CEP170P1Q96L14 293 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 FDXACB1Q9BRP7 624 aaPredicted RBP11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 INO80BQ9C086 356 aaPredicted RBP11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 IGFLR1Q9H665 355 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 ZSWIM4Q9H7M6 989 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 CLDND1Q9NY35 253 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 DACT1Q9NYF0 836 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 RGL1Q9NZL6 768 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 WRAP73Q9P2S5 460 aaPredicted RBP11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 PPME1Q9Y570 386 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 BDP1A6H8Y1 2624 aa11.1□□□□□ -0.63
AC004858.1-201ENST00000554078 CSPG5O95196 566 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 YWHABP31946 246 aaKnown RBP11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 LTBRP36941 435 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 SPIRE1Q08AE8 756 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 SAFBQ15424 915 aaKnown RBP eCLIP11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 CALCRLQ16602 461 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 KSR1Q8IVT5 923 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 TPH2Q8IWU9 490 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 ABI1Q8IZP0 508 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 RNF169Q8NCN4 708 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 MICAL1Q8TDZ2 1067 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 POF1BQ8WVV4 589 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 PRPF31Q8WWY3 499 aaKnown RBP11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 PPP2R3CQ969Q6 453 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 DYDC2Q96IM9 177 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 ZSCAN31Q96LW9 406 aaPredicted RBP11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 CASD1Q96PB1 797 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 HSD17B14Q9BPX1 270 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 LLPHQ9BRT6 129 aaKnown RBP11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 LXNQ9BS40 222 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 TMEM117Q9H0C3 514 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 CWH43Q9H720 699 aa11.09□□□□□ -0.63
AC004858.1-201ENST00000554078 ZBTB39O15060 712 aa11.08□□□□□ -0.64
AC004858.1-201ENST00000554078 FGF18O76093 207 aa11.08□□□□□ -0.64
AC004858.1-201ENST00000554078 SRGAP2CP0DJJ0 459 aa11.08□□□□□ -0.64
AC004858.1-201ENST00000554078 SFPQP23246 707 aaKnown RBP eCLIP11.08□□□□□ -0.64
AC004858.1-201ENST00000554078 GTF2F1P35269 517 aaKnown RBP eCLIP11.08□□□□□ -0.64
AC004858.1-201ENST00000554078 IRS1P35568 1242 aa11.08□□□□□ -0.64
AC004858.1-201ENST00000554078 RFC5P40937 340 aa11.08□□□□□ -0.64
AC004858.1-201ENST00000554078 TXKP42681 527 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms