RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CTSHP09668 335 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 TXKP42681 527 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 PSMC5P62195 406 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 PTK2Q05397 1052 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 RBL2Q08999 1139 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 PPP2R5CQ13362 524 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 XKR3Q5GH77 459 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 TTC38Q5R3I4 469 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 TMEM240Q5SV17 173 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 ODR4Q5SWX8 454 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 C9orf50Q5SZB4 431 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 ZNF618Q5T7W0 954 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 OTUD6AQ7L8S5 288 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 OTOP2Q7RTS6 562 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 EXOC8Q8IYI6 725 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 NME8Q8N427 588 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 ERMNQ8TAM6 284 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 FAM174AQ8TBP5 190 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 TNFRSF25Q93038 417 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 MAP7D2Q96T17 732 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 PCYT2Q99447 389 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 JPH2Q9BR39 696 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-209ENST00000553855 FAM49AQ9H0Q0 323 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-209ENST00000553855 WNT8AQ9H1J5 351 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 KCNMB3Q9NPA1 279 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 EVA1BQ9NVM1 165 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 ZMIZ1Q9ULJ6 1067 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 TELO2Q9Y4R8 837 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 SLC4A7Q9Y6M7 1214 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 SCN10AQ9Y5Y9 1956 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 MYH7BA7E2Y1 1941 aa9.35□□□□□ -0.91
PSEN1-209ENST00000553855 SMIM35A0A1B0GVV1 85 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 VPS37CA5D8V6 355 aaPredicted RBP9.34□□□□□ -0.91
PSEN1-209ENST00000553855 BAIAP3O94812 1187 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 CD2BP2O95400 341 aaKnown RBP9.34□□□□□ -0.91
PSEN1-209ENST00000553855 P4HBP07237 508 aaKnown RBP9.34□□□□□ -0.91
PSEN1-209ENST00000553855 OR52Z1P0C646 297 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 KLRC1P26715 233 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 HOXC8P31273 242 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 QARSP47897 775 aaKnown RBP9.34□□□□□ -0.91
PSEN1-209ENST00000553855 DNM2P50570 870 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 MCCD1P59942 119 aaPredicted RBP9.34□□□□□ -0.91
PSEN1-209ENST00000553855 PRKCEQ02156 737 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 TBC1D8BQ0IIM8 1120 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 KCNH2Q12809 1159 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 IKBKEQ14164 716 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 EPHA7Q15375 998 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 ZNF174Q15697 407 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 RILPL1Q5EBL4 403 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 EARS2Q5JPH6 523 aaKnown RBP9.34□□□□□ -0.91
PSEN1-209ENST00000553855 CNKSR3Q6P9H4 555 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 MTHFD1LQ6UB35 978 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 METTL13Q8N6R0 699 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 NEK9Q8TD19 979 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 DNAJB3Q8WWF6 145 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 HERVK_113Q902F9 699 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 SEPT8Q92599 483 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 DHX38Q92620 1227 aaKnown RBP9.34□□□□□ -0.91
PSEN1-209ENST00000553855 APBB2Q92870 758 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 INTS4Q96HW7 963 aaKnown RBP9.34□□□□□ -0.91
PSEN1-209ENST00000553855 SCLT1Q96NL6 688 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 TTC12Q9H892 705 aaPredicted RBP9.34□□□□□ -0.91
PSEN1-209ENST00000553855 MSRAQ9UJ68 235 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 NOVA2Q9UNW9 492 aaKnown RBP9.34□□□□□ -0.91
PSEN1-209ENST00000553855 PCDHA2Q9Y5H9 948 aa9.34□□□□□ -0.91
PSEN1-209ENST00000553855 IGSF9BQ9UPX0 1349 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 ABHD14A-ACY1A0A1B0GW23 586 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 MBLAC1A4D2B0 266 aaPredicted RBP9.33□□□□□ -0.92
PSEN1-209ENST00000553855 U2AF2P26368 475 aaKnown RBP eCLIP9.33□□□□□ -0.92
PSEN1-209ENST00000553855 MMP16P51512 607 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 EPHB4P54760 987 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 ADAM17P78536 824 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 MRPS6P82932 125 aaKnown RBP9.33□□□□□ -0.92
PSEN1-209ENST00000553855 SMAD3P84022 425 aaKnown RBP9.33□□□□□ -0.92
PSEN1-209ENST00000553855 CUL4AQ13619 759 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 RAB30Q15771 203 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 TRIM71Q2Q1W2 868 aaKnown RBP9.33□□□□□ -0.92
PSEN1-209ENST00000553855 TMEM164Q5U3C3 297 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 RPAINQ86UA6 219 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 FAM160A2Q8N612 972 aaPredicted RBP9.33□□□□□ -0.92
PSEN1-209ENST00000553855 USP38Q8NB14 1042 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 STK32AQ8WU08 396 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 TRAPPC12Q8WVT3 735 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 GJA10Q969M2 543 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 SNX21Q969T3 373 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 SLC9A7Q96T83 725 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 ZSWIM4Q9H7M6 989 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 AKT3Q9Y243 479 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 GINS2Q9Y248 185 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 PPME1Q9Y570 386 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 TRPV2Q9Y5S1 764 aa9.33□□□□□ -0.92
PSEN1-209ENST00000553855 MKI67P46013 3256 aaKnown RBP9.33□□□□□ -0.92
PSEN1-209ENST00000553855 CEP290O15078 2479 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 LAD1O00515 517 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 EDIL3O43854 480 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 BMP15O95972 392 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 AMHP03971 560 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 ATP2A2P16615 1042 aaKnown RBP9.32□□□□□ -0.92
PSEN1-209ENST00000553855 FXR1P51114 621 aaKnown RBP eCLIP9.32□□□□□ -0.92
PSEN1-209ENST00000553855 CDC42EP1Q00587 391 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms