RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 RILPL2Q969X0 211 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 MXRA8Q9BRK3 442 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 AZI2Q9H6S1 392 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 AGO4Q9HCK5 861 aaKnown RBP10.37□□□□□ -0.75
PRKCH-208ENST00000553846 DBR1Q9UK59 544 aaKnown RBP10.37□□□□□ -0.75
PRKCH-208ENST00000553846 GINS2Q9Y248 185 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 COL4A3Q01955 1670 aa10.37□□□□□ -0.75
PRKCH-208ENST00000553846 IFIT3O14879 490 aaKnown RBP10.36□□□□□ -0.75
PRKCH-208ENST00000553846 DHX15O43143 795 aaKnown RBP10.36□□□□□ -0.75
PRKCH-208ENST00000553846 HBP1O60381 514 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 B4GALT3O60512 393 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 LILRB3O75022 631 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 PLEKHA8P1O95397 391 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 VTNP04004 478 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 SP9P0CG40 484 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 CTSAP10619 480 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 GLULP15104 373 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 POLGP54098 1239 aaPredicted RBP10.36□□□□□ -0.75
PRKCH-208ENST00000553846 BCAR1P56945 870 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 PTPN14Q15678 1187 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 ODR4Q5SWX8 454 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 TMC5Q6UXY8 1006 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 MB21D2Q8IYB1 491 aaPredicted RBP10.36□□□□□ -0.75
PRKCH-208ENST00000553846 DCLK2Q8N568 766 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 RUBCNQ92622 972 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 TNPO1Q92973 898 aaKnown RBP10.36□□□□□ -0.75
PRKCH-208ENST00000553846 RRP36Q96EU6 259 aaKnown RBP10.36□□□□□ -0.75
PRKCH-208ENST00000553846 RHOBTB2Q9BYZ6 727 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 LNPKQ9C0E8 428 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 PSTPIP2Q9H939 334 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 SFXN1Q9H9B4 322 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 LY9Q9HBG7 655 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 WNT16Q9UBV4 365 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 PCDHA6Q9UN73 950 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 PCDHA8Q9Y5H6 950 aa10.36□□□□□ -0.75
PRKCH-208ENST00000553846 MYH9P35579 1960 aaKnown RBP10.35□□□□□ -0.75
PRKCH-208ENST00000553846 FAM208BQ5VWN6 2430 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 WDFY3Q8IZQ1 3526 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 A0A0U1RQF3 1178 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.35□□□□□ -0.75
PRKCH-208ENST00000553846 POTEMA6NI47 508 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 NT5C1B-RDH14C9J2C7 533 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 MEIS1O00470 390 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 DDAH1O94760 285 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 CLCN4P51793 760 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 ZNF484Q5JVG2 852 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 TYW1BQ6NUM6 668 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 POTEGQ6S5H5 508 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 C15orf39Q6ZRI6 1047 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 CCDC149Q6ZUS6 474 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 OTOP3Q7RTS5 596 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 SMC5Q8IY18 1101 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 ZNF654Q8IZM8 581 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 VPS52Q8N1B4 723 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 CRYGNQ8WXF5 182 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 RSAD2Q8WXG1 361 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 RIN2Q8WYP3 895 aaPredicted RBP10.35□□□□□ -0.75
PRKCH-208ENST00000553846 PPP1R16BQ96T49 567 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 MYL10Q9BUA6 226 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 TRAIPQ9BWF2 469 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 DIAPH3Q9NSV4 1193 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 IGSF9Q9P2J2 1179 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 EPS15L1Q9UBC2 864 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 ZFYVE26Q68DK2 2539 aa10.35□□□□□ -0.75
PRKCH-208ENST00000553846 CXCL14O95715 111 aa10.34□□□□□ -0.75
PRKCH-208ENST00000553846 TGM1P22735 817 aa10.34□□□□□ -0.75
PRKCH-208ENST00000553846 METAP2P50579 478 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRKCH-208ENST00000553846 RSPO4Q2I0M5 234 aaPredicted RBP10.34□□□□□ -0.75
PRKCH-208ENST00000553846 LETM2Q2VYF4 491 aa10.34□□□□□ -0.75
PRKCH-208ENST00000553846 CEP55Q53EZ4 464 aa10.34□□□□□ -0.75
PRKCH-208ENST00000553846 PHLDB3Q6NSJ2 640 aa10.34□□□□□ -0.75
PRKCH-208ENST00000553846 DDX53Q86TM3 631 aaKnown RBP10.34□□□□□ -0.75
PRKCH-208ENST00000553846 CMASQ8NFW8 434 aaPredicted RBP10.34□□□□□ -0.75
PRKCH-208ENST00000553846 HELQQ8TDG4 1101 aa10.34□□□□□ -0.75
PRKCH-208ENST00000553846 ACSF2Q96CM8 615 aaPredicted RBP10.34□□□□□ -0.75
PRKCH-208ENST00000553846 IGSF21Q96ID5 467 aa10.34□□□□□ -0.75
PRKCH-208ENST00000553846 TBC1D17Q9HA65 648 aa10.34□□□□□ -0.75
PRKCH-208ENST00000553846 MAFBQ9Y5Q3 323 aaPredicted RBP10.34□□□□□ -0.75
PRKCH-208ENST00000553846 MIA3Q5JRA6 1907 aa10.34□□□□□ -0.75
PRKCH-208ENST00000553846 IGLV3-22A0A075B6J6 115 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 E7EWF7 191 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 HIP1O00291 1037 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 EFEMP2O95967 443 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 GALTP07902 379 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 CFHP08603 1231 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 DARSP14868 501 aaKnown RBP10.33□□□□□ -0.76
PRKCH-208ENST00000553846 EIF4BP23588 611 aaKnown RBP10.33□□□□□ -0.76
PRKCH-208ENST00000553846 SREBF1P36956 1147 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 CLCN3P51790 818 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 PTH1RQ03431 593 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 TBC1D8BQ0IIM8 1120 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 GIT2Q14161 759 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 NIPA1Q7RTP0 329 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 CATIPQ7Z7H3 387 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 CABP7Q86V35 215 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 CMTR1Q8N1G2 835 aaKnown RBP10.33□□□□□ -0.76
PRKCH-208ENST00000553846 SLC44A3Q8N4M1 653 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 KCNG4Q8TDN1 519 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 NELL1Q92832 810 aa10.33□□□□□ -0.76
PRKCH-208ENST00000553846 LZTS2Q9BRK4 669 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms