RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 NECAB3Q96P71 396 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-225ENST00000551845 USP28Q96RU2 1077 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 DHX33Q9H6R0 707 aaKnown RBP11.84□□□□□ -0.51
PTCH1-225ENST00000551845 SUCLA2Q9P2R7 463 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-225ENST00000551845 TFIP11Q9UBB9 837 aaKnown RBP11.84□□□□□ -0.51
PTCH1-225ENST00000551845 MSRAQ9UJ68 235 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 DBR1Q9UK59 544 aaKnown RBP11.84□□□□□ -0.51
PTCH1-225ENST00000551845 DNM3Q9UQ16 869 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 HCN4Q9Y3Q4 1203 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 KDM3AQ9Y4C1 1321 aa11.84□□□□□ -0.51
PTCH1-225ENST00000551845 TCF20Q9UGU0 1960 aaKnown RBP11.83□□□□□ -0.52
PTCH1-225ENST00000551845 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 GPR182O15218 404 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 ASAP2O43150 1006 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 GAS2O43903 313 aaKnown RBP11.83□□□□□ -0.52
PTCH1-225ENST00000551845 VTNP04004 478 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 GHRP10912 638 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 MARCKSP29966 332 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-225ENST00000551845 LONP1P36776 959 aaKnown RBP11.83□□□□□ -0.52
PTCH1-225ENST00000551845 KCNJ6P48051 423 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 RARRES1P49788 294 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 STK38Q15208 465 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 PTPAQ15257 358 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 ZRSR1Q15695 479 aaKnown RBP11.83□□□□□ -0.52
PTCH1-225ENST00000551845 KIZQ2M2Z5 673 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 FBXO47Q5MNV8 452 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 RASIP1Q5U651 963 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 ATL3Q6DD88 541 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 TSHZ1Q6ZSZ6 1077 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 MICALL1Q8N3F8 863 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 LINC01465Q8N7H1 131 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 PHOSPHO2Q8TCD6 241 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 CDK5RAP3Q96JB5 506 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 SCLT1Q96NL6 688 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 MTRQ99707 1265 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
PTCH1-225ENST00000551845 INO80BQ9C086 356 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-225ENST00000551845 NT5C3AQ9H0P0 336 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 CDHR5Q9HBB8 845 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 DDX19AQ9NUU7 478 aaKnown RBP11.83□□□□□ -0.52
PTCH1-225ENST00000551845 CXXC1Q9P0U4 656 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-225ENST00000551845 CFAP45Q9UL16 551 aa11.83□□□□□ -0.52
PTCH1-225ENST00000551845 SRPRBQ9Y5M8 271 aaKnown RBP11.83□□□□□ -0.52
PTCH1-225ENST00000551845 CDH23Q9H251 3354 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 ARHGEF35A5YM69 484 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 PP2D1A8MPX8 630 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 SLC26A4O43511 780 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 GPR32O75388 356 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 RPS6KA5O75582 802 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 NASPP49321 788 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-225ENST00000551845 NFX1Q12986 1120 aaKnown RBP11.82□□□□□ -0.52
PTCH1-225ENST00000551845 ADGRE1Q14246 886 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 LPIN1Q14693 890 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 ECM1Q16610 540 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 FOXD4L6Q3SYB3 417 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-225ENST00000551845 POTEGQ6S5H5 508 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 PADI6Q6TGC4 694 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 FOXD4L3Q6VB84 417 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-225ENST00000551845 RHPN2Q8IUC4 686 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 NLRP7Q8WX94 980 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 TMEM143Q96AN5 459 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 CALML4Q96GE6 196 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 PPP1R16BQ96T49 567 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 FTHL17Q9BXU8 183 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 GCOM2Q9BZD3 368 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-225ENST00000551845 ADAMTS10Q9H324 1103 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 ATP6V0A4Q9HBG4 840 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 ATP6V1DQ9Y5K8 247 aa11.82□□□□□ -0.52
PTCH1-225ENST00000551845 ENPP3O14638 875 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 SPTLC2O15270 562 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 BRD1O95696 1058 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 AMHP03971 560 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 ATP2A2P16615 1042 aaKnown RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 EIF4BP23588 611 aaKnown RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 CD52P31358 61 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 GPC3P51654 580 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 PAK2Q13177 524 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 DRP2Q13474 957 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 PKP1Q13835 747 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 MXD4Q14582 209 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 EMC2Q15006 297 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 RAB30Q15771 203 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 CABP7Q86V35 215 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 ZNF410Q86VK4 478 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 KRI1Q8N9T8 703 aaKnown RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 LINC00301Q8NCQ3 95 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 MCPH1Q8NEM0 835 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 PRPF31Q8WWY3 499 aaKnown RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 PSPC1Q8WXF1 523 aaKnown RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 OSMRQ99650 979 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 MMTAG2Q9BU76 263 aaKnown RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 OSBPL7Q9BZF2 842 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 BHMT2Q9H2M3 363 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 NKX2-4Q9H2Z4 354 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 AGO3Q9H9G7 860 aaKnown RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 BMP2KQ9NSY1 1161 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-225ENST00000551845 CCDC39Q9UFE4 941 aa11.81□□□□□ -0.52
PTCH1-225ENST00000551845 PADI3Q9ULW8 664 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms