RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 LOXHD1Q8IVV2 1947 aa18.7■□□□□ 0.58
BRF1-219ENST00000551787 TRANK1O15050 2925 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 A0A087WZ62 844 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 H3BQV1 296 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 GTPBP6O43824 516 aaPredicted RBP18.69■□□□□ 0.58
BRF1-219ENST00000551787 DGKIO75912 1065 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 OR52Z1P0C646 297 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 DARSP14868 501 aaKnown RBP18.69■□□□□ 0.58
BRF1-219ENST00000551787 PAN2Q504Q3 1202 aaKnown RBP18.69■□□□□ 0.58
BRF1-219ENST00000551787 CRIPAKQ8N1N5 446 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 FIBCD1Q8N539 461 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 C4orf32Q8N8J7 132 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 PIGOQ8TEQ8 1089 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 SLC7A3Q8WY07 619 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 FDXACB1Q9BRP7 624 aaPredicted RBP18.69■□□□□ 0.58
BRF1-219ENST00000551787 LRFN2Q9ULH4 789 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 PCDHB7Q9Y5E2 793 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 PCDHB6Q9Y5E3 794 aa18.69■□□□□ 0.58
BRF1-219ENST00000551787 PRRC2BQ5JSZ5 2229 aaKnown RBP18.68■□□□□ 0.58
BRF1-219ENST00000551787 SRGAP2CP0DJJ0 459 aa18.68■□□□□ 0.58
BRF1-219ENST00000551787 TRAPPC10P48553 1259 aa18.68■□□□□ 0.58
BRF1-219ENST00000551787 BTG3Q14201 252 aaPredicted RBP18.68■□□□□ 0.58
BRF1-219ENST00000551787 EPC2Q52LR7 807 aa18.68■□□□□ 0.58
BRF1-219ENST00000551787 ODR4Q5SWX8 454 aa18.68■□□□□ 0.58
BRF1-219ENST00000551787 NPAS4Q8IUM7 802 aa18.68■□□□□ 0.58
BRF1-219ENST00000551787 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.68■□□□□ 0.58
BRF1-219ENST00000551787 TMEM192Q8IY95 271 aa18.68■□□□□ 0.58
BRF1-219ENST00000551787 FBXO22Q8NEZ5 403 aa18.68■□□□□ 0.58
BRF1-219ENST00000551787 PRPF31Q8WWY3 499 aaKnown RBP18.68■□□□□ 0.58
BRF1-219ENST00000551787 NLRP4Q96MN2 994 aa18.68■□□□□ 0.58
BRF1-219ENST00000551787 DHX33Q9H6R0 707 aaKnown RBP18.68■□□□□ 0.58
BRF1-219ENST00000551787 RGS18Q9NS28 235 aa18.68■□□□□ 0.58
BRF1-219ENST00000551787 REV3LO60673 3130 aa18.68■□□□□ 0.58
BRF1-219ENST00000551787 TTC3P53804 2025 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 MED24O75448 989 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 STAG3L1P0CL83 205 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 SPATA31C1P0DKV0 1188 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 SARSP49591 514 aaKnown RBP18.67■□□□□ 0.58
BRF1-219ENST00000551787 PTGDRQ13258 359 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 DSC3Q14574 896 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 EMC2Q15006 297 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 FAM102BQ5T8I3 360 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 LARP1BQ659C4 914 aaKnown RBP18.67■□□□□ 0.58
BRF1-219ENST00000551787 SLC24A5Q71RS6 500 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 ZNF710Q8N1W2 664 aa18.67■□□□□ 0.58
BRF1-219ENST00000551787 ZNF689Q96CS4 500 aaPredicted RBP18.67■□□□□ 0.58
BRF1-219ENST00000551787 JPH2Q9BR39 696 aaPredicted RBP18.67■□□□□ 0.58
BRF1-219ENST00000551787 GCOM2Q9BZD3 368 aaPredicted RBP18.67■□□□□ 0.58
BRF1-219ENST00000551787 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.67■□□□□ 0.58
BRF1-219ENST00000551787 C9IYK1 514 aa18.66■□□□□ 0.58
BRF1-219ENST00000551787 ZSCAN20P17040 1043 aaPredicted RBP18.66■□□□□ 0.58
BRF1-219ENST00000551787 RFC5P40937 340 aa18.66■□□□□ 0.58
BRF1-219ENST00000551787 CDC42EP1Q00587 391 aa18.66■□□□□ 0.58
BRF1-219ENST00000551787 ORC2Q13416 577 aaPredicted RBP18.66■□□□□ 0.58
BRF1-219ENST00000551787 SKIV2LQ15477 1246 aaKnown RBP18.66■□□□□ 0.58
BRF1-219ENST00000551787 NEK9Q8TD19 979 aa18.66■□□□□ 0.58
BRF1-219ENST00000551787 RC3H2Q9HBD1 1191 aaKnown RBP18.66■□□□□ 0.58
BRF1-219ENST00000551787 COL4A3BPQ9Y5P4 624 aa18.66■□□□□ 0.58
BRF1-219ENST00000551787 ADGRA3Q8IWK6 1321 aa18.66■□□□□ 0.58
BRF1-219ENST00000551787 VCANP13611 3396 aa18.65■□□□□ 0.58
BRF1-219ENST00000551787 LYPLA2O95372 231 aa18.65■□□□□ 0.58
BRF1-219ENST00000551787 POU3F3P20264 500 aaPredicted RBP18.65■□□□□ 0.58
BRF1-219ENST00000551787 FAM189BP81408 668 aa18.65■□□□□ 0.58
BRF1-219ENST00000551787 LAMTOR4Q0VGL1 99 aa18.65■□□□□ 0.58
BRF1-219ENST00000551787 GPM6BQ13491 265 aa18.65■□□□□ 0.58
BRF1-219ENST00000551787 RNF169Q8NCN4 708 aa18.65■□□□□ 0.58
BRF1-219ENST00000551787 PSPC1Q8WXF1 523 aaKnown RBP18.65■□□□□ 0.58
BRF1-219ENST00000551787 CCDC43Q96MW1 224 aaKnown RBP18.65■□□□□ 0.58
BRF1-219ENST00000551787 XPNPEP1Q9NQW7 623 aa18.65■□□□□ 0.58
BRF1-219ENST00000551787 C1orf112Q9NSG2 853 aa18.65■□□□□ 0.58
BRF1-219ENST00000551787 ANKEF1Q9NU02 776 aa18.65■□□□□ 0.58
BRF1-219ENST00000551787 MRPL42Q9Y6G3 142 aaKnown RBP18.65■□□□□ 0.58
BRF1-219ENST00000551787 LINC00271P0C7V0 271 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 FGFR1P11362 822 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 CTNNB1P35222 781 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 CUL4AQ13619 759 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 IL17AQ16552 155 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 POTEGQ6S5H5 508 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 MAEAQ7L5Y9 396 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 ZNF410Q86VK4 478 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 EXOC8Q8IYI6 725 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 MTRQ99707 1265 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 ATP6V0A4Q9HBG4 840 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 IFT122Q9HBG6 1241 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 PPME1Q9Y570 386 aa18.64■□□□□ 0.57
BRF1-219ENST00000551787 TBKBP1A7MCY6 615 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 CSPG5O95196 566 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 BMPR1AP36894 532 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 RARRES1P49788 294 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 CATSPER4Q7RTX7 472 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 FERMT3Q86UX7 667 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 RNF149Q8NC42 400 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 ERMNQ8TAM6 284 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 TCP11Q8WWU5 503 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 SAMD11Q96NU1 681 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 POLR3CQ9BUI4 534 aaPredicted RBP18.63■□□□□ 0.57
BRF1-219ENST00000551787 MINDY3Q9H8M7 445 aa18.63■□□□□ 0.57
BRF1-219ENST00000551787 TUFT1Q9NNX1 390 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms