RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 ARL2P36404 184 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 PRCPP42785 496 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 PSEN2P49810 448 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 BEX3Q00994 111 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 STK4Q13043 487 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 PAK1Q13153 545 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 MAPK7Q13164 816 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 GRIK4Q16099 956 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 UVSSAQ2YD98 709 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 SFR1Q86XK3 245 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 ENOX1Q8TC92 643 aaKnown RBP11.49□□□□□ -0.57
NEK3-203ENST00000551355 PSPC1Q8WXF1 523 aaKnown RBP11.49□□□□□ -0.57
NEK3-203ENST00000551355 KAT2BQ92831 832 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 LENG1Q96BZ8 264 aaPredicted RBP11.49□□□□□ -0.57
NEK3-203ENST00000551355 HVCN1Q96D96 273 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.49□□□□□ -0.571e-5■■■□□ 18
NEK3-203ENST00000551355 SLC39A2Q9NP94 309 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 RWDD2AQ9UIY3 292 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 PCDHA2Q9Y5H9 948 aa11.49□□□□□ -0.57
NEK3-203ENST00000551355 MCM3APO60318 1980 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 DOCK3Q8IZD9 2030 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 RSPH10B2B2RC85 870 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 C22orf31O95567 290 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 FGFR1OPO95684 399 aaKnown RBP11.48□□□□□ -0.57
NEK3-203ENST00000551355 RSPH10BP0C881 870 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 HSPA1AP0DMV8 641 aaKnown RBP11.48□□□□□ -0.57
NEK3-203ENST00000551355 HSPA1BP0DMV9 641 aaKnown RBP11.48□□□□□ -0.57
NEK3-203ENST00000551355 SMIM10L2AP0DMW4 78 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 SMIM10L2BP0DMW5 78 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 PTGS1P23219 599 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 NAMPTP43490 491 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 SNRPFP62306 86 aaKnown RBP11.48□□□□□ -0.57
NEK3-203ENST00000551355 MYL5Q02045 173 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 LRRC63Q05C16 580 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 PTPN11Q06124 597 aaPredicted RBP11.48□□□□□ -0.57
NEK3-203ENST00000551355 POU5F1BQ06416 359 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 TFDP1Q14186 410 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 KCNA10Q16322 511 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 BMT2Q1RMZ1 405 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 LHX8Q68G74 356 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 CCSAPQ6IQ19 270 aaPredicted RBP11.48□□□□□ -0.57
NEK3-203ENST00000551355 C11orf57Q6ZUT1 292 aaPredicted RBP11.48□□□□□ -0.57
NEK3-203ENST00000551355 MAEAQ7L5Y9 396 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 ZNF720Q7Z2F6 126 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 SESTD1Q86VW0 696 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 DAW1Q8N136 415 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 C7orf31Q8N865 590 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 KIAA0895Q8NCT3 520 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 GOLGA5Q8TBA6 731 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 TSG101Q99816 390 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 SH2D3AQ9BRG2 576 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 POLR3FQ9H1D9 316 aaPredicted RBP11.48□□□□□ -0.57
NEK3-203ENST00000551355 TMEM206Q9H813 350 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 PAK6Q9NQU5 681 aaPredicted RBP11.48□□□□□ -0.57
NEK3-203ENST00000551355 XPNPEP1Q9NQW7 623 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 CGNQ9P2M7 1197 aaKnown RBP11.48□□□□□ -0.57
NEK3-203ENST00000551355 GDAQ9Y2T3 454 aa11.48□□□□□ -0.57
NEK3-203ENST00000551355 LOXHD1Q8IVV2 1947 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 ZSWIM8A7E2V4 1837 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 FSD2A1L4K1 749 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 C17orf102A2RUQ5 167 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 MBLAC1A4D2B0 266 aaPredicted RBP11.47□□□□□ -0.57
NEK3-203ENST00000551355 SFI1A8K8P3 1242 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 GCNT3O95395 438 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 ASGR1P07306 291 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 CCNE1P24864 410 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 KLRC1P26715 233 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 NPTX2P47972 431 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 MRE11P49959 708 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 EFNA5P52803 228 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 LBX1P52954 281 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 NCKAP1LP55160 1127 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 PEX3P56589 373 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 HSP90AA2PQ14568 343 aaPredicted RBP11.47□□□□□ -0.57
NEK3-203ENST00000551355 LRRC41Q15345 812 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 L1TD1Q5T7N2 865 aaKnown RBP11.47□□□□□ -0.57
NEK3-203ENST00000551355 SPATA1Q5VX52 437 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 CENPPQ6IPU0 288 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 EFCAB12Q6NXP0 572 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 NFRKBQ6P4R8 1299 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 MTHFD1LQ6UB35 978 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 EPM2AIP1Q7L775 607 aaPredicted RBP11.47□□□□□ -0.57
NEK3-203ENST00000551355 GAS2L3Q86XJ1 694 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 ZNF507Q8TCN5 953 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 SH3TC2Q8TF17 1288 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 NOC3LQ8WTT2 800 aaKnown RBP11.47□□□□□ -0.57
NEK3-203ENST00000551355 NELFBQ8WX92 580 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 P2RX5Q93086 422 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 MAP7D2Q96T17 732 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 C2orf40Q9H1Z8 148 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 SUGCTQ9HAC7 445 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 CBX8Q9HC52 389 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 EXOC7Q9UPT5 735 aa11.47□□□□□ -0.57
NEK3-203ENST00000551355 SMIM35A0A1B0GVV1 85 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 MYADML2A6NDP7 307 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 CCDC169A6NNP5 214 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 KBTBD13C9JR72 458 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 K7ENM7 598 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 PDXKO00764 312 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms