RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 SEC31AO94979 1220 aaKnown RBP13.16□□□□□ -0.3
NR4A1-215ENST00000550557 THPOP40225 353 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 ZNF699Q32M78 642 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 PPP1R2P3Q6NXS1 205 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 NLGN2Q8NFZ4 835 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 SPATC1LQ9H0A9 340 aa13.16□□□□□ -0.3
NR4A1-215ENST00000550557 C17orf102A2RUQ5 167 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 SMIM23A6NLE4 172 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 STRNO43815 780 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 VIL1P09327 827 aaKnown RBP13.15□□□□□ -0.3
NR4A1-215ENST00000550557 STAG3L1P0CL83 205 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 CCNE1P24864 410 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 SLC12A2P55011 1212 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 ST3GAL1Q11201 340 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 CUL4BQ13620 913 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 ZSCAN26Q16670 478 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 MAN2A1Q16706 1144 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 PPM1EQ8WY54 764 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 TAAR1Q96RJ0 339 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 KCNQ5Q9NR82 932 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 SLIT3O75094 1523 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 PFDN6O15212 129 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 PRKCBP05771 671 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 RECQLP46063 649 aaPredicted RBP13.15□□□□□ -0.3
NR4A1-215ENST00000550557 ITIH3Q06033 890 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 PAK2Q13177 524 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 KYAT1Q16773 422 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 DAAM2Q86T65 1068 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 TRIM11Q96F44 468 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 ACAP3Q96P50 834 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 JMJD4Q9H9V9 463 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 GCNT4Q9P109 453 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 TOPAZ1Q8N9V7 1692 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 CLUL1Q15846 466 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 FKBP1CQ5VVH2 108 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 ZNF560Q96MR9 790 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 CAMKK2Q96RR4 588 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 AGXT2Q9BYV1 514 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
NR4A1-215ENST00000550557 SRGAP2BP0DMP2 458 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 EEF1GP26641 437 aaKnown RBP13.15□□□□□ -0.3
NR4A1-215ENST00000550557 GTF2A1P52655 376 aaPredicted RBP13.15□□□□□ -0.3
NR4A1-215ENST00000550557 SP3Q02447 781 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 KRT17Q04695 432 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 SEL1LQ9UBV2 794 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 KIF13AQ9H1H9 1805 aa13.15□□□□□ -0.3
NR4A1-215ENST00000550557 STXBP3O00186 592 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 CYP2C8P10632 490 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 FGFR2P21802 821 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 ARL4AP40617 200 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 IQCB1Q15051 598 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 PLCB4Q15147 1175 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 HPS5Q9UPZ3 1129 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 FKTNO75072 461 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 COPB1P53618 953 aaKnown RBP13.14□□□□□ -0.31
NR4A1-215ENST00000550557 PPP2R5CQ13362 524 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 PTPN21Q16825 1174 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 ZNF394Q53GI3 561 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 DNAJC24Q6P3W2 148 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 SHC4Q6S5L8 630 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 UNC13DQ70J99 1090 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 ANKRD7Q92527 254 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 FKBP1BP68106 108 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 NAA30Q147X3 362 aaPredicted RBP13.14□□□□□ -0.31
NR4A1-215ENST00000550557 RINT1Q6NUQ1 792 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 NUDT18Q6ZVK8 323 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 FBF1Q8TES7 1133 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 ATRIPQ8WXE1 791 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 TMEM143Q96AN5 459 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 PAGE5Q96GU1 130 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 PSMB7Q99436 277 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 TRIM31Q9BZY9 425 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
NR4A1-215ENST00000550557 RGL1Q9NZL6 768 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 BZW2Q9Y6E2 419 aaKnown RBP13.14□□□□□ -0.31
NR4A1-215ENST00000550557 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 ASAP2O43150 1006 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 FKBP1AP62942 108 aaKnown RBP13.14□□□□□ -0.31
NR4A1-215ENST00000550557 TERF2Q15554 542 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 ARL13BQ3SXY8 428 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 RAD54LQ92698 747 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
NR4A1-215ENST00000550557 MXRA8Q9BRK3 442 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 LTN1O94822 1766 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 ITGA4P13612 1032 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 NFKBIAP25963 317 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 LRRC63Q05C16 580 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 ZNF449Q6P9G9 518 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 AFG1LQ8WV93 481 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 MRRFQ96E11 262 aaKnown RBP13.13□□□□□ -0.31
NR4A1-215ENST00000550557 CCDC68Q9H2F9 335 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 PCDHB7Q9Y5E2 793 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 NNMTP40261 264 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 SRGAP1Q7Z6B7 1085 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 KIAA1683Q9H0B3 1180 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms