RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 RGS18Q9NS28 235 aa15.09■□□□□ 0.01
NUP188-211ENST00000550219 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
NUP188-211ENST00000550219 SEPT9Q9UHD8 586 aaPredicted RBP15.09■□□□□ 0.01
NUP188-211ENST00000550219 PCDHA4Q9UN74 947 aa15.09■□□□□ 0.01
NUP188-211ENST00000550219 HCN4Q9Y3Q4 1203 aa15.09■□□□□ 0.01
NUP188-211ENST00000550219 PLXNA4Q9HCM2 1894 aa15.09■□□□□ 0.01
NUP188-211ENST00000550219 BRWD1Q9NSI6 2320 aa15.09■□□□□ 0.01
NUP188-211ENST00000550219 C9IYK1 514 aa15.08■□□□□ 0
NUP188-211ENST00000550219 PI4K2BG5E9Z4 385 aa15.08■□□□□ 0
NUP188-211ENST00000550219 MAGEB2O15479 319 aa15.08■□□□□ 0
NUP188-211ENST00000550219 EDIL3O43854 480 aa15.08■□□□□ 0
NUP188-211ENST00000550219 GPR32O75388 356 aa15.08■□□□□ 0
NUP188-211ENST00000550219 TMOD1P28289 359 aa15.08■□□□□ 0
NUP188-211ENST00000550219 JAK3P52333 1124 aa15.08■□□□□ 0
NUP188-211ENST00000550219 ZP2Q05996 745 aa15.08■□□□□ 0
NUP188-211ENST00000550219 CTC1Q2NKJ3 1217 aa15.08■□□□□ 0
NUP188-211ENST00000550219 NAALADL2Q58DX5 795 aa15.08■□□□□ 0
NUP188-211ENST00000550219 MIER3Q7Z3K6 550 aa15.08■□□□□ 0
NUP188-211ENST00000550219 THNSL1Q8IYQ7 743 aa15.08■□□□□ 0
NUP188-211ENST00000550219 FAM184AQ8NB25 1140 aa15.08■□□□□ 0
NUP188-211ENST00000550219 RNF169Q8NCN4 708 aa15.08■□□□□ 0
NUP188-211ENST00000550219 SLC5A5Q92911 643 aa15.08■□□□□ 0
NUP188-211ENST00000550219 AAASQ9NRG9 546 aa15.08■□□□□ 0
NUP188-211ENST00000550219 PCDHB12Q9Y5F1 795 aa15.08■□□□□ 0
NUP188-211ENST00000550219 MYH9P35579 1960 aaKnown RBP15.07■□□□□ 0
NUP188-211ENST00000550219 MBTPS2O43462 519 aa15.07■□□□□ 0
NUP188-211ENST00000550219 FGFR4P22455 802 aa15.07■□□□□ 0
NUP188-211ENST00000550219 SFNP31947 248 aa15.07■□□□□ 0
NUP188-211ENST00000550219 DDIT3P35638 169 aa15.07■□□□□ 0
NUP188-211ENST00000550219 NRIP1P48552 1158 aa15.07■□□□□ 0
NUP188-211ENST00000550219 USP11P51784 963 aa15.07■□□□□ 0
NUP188-211ENST00000550219 TBC1D8BQ0IIM8 1120 aa15.07■□□□□ 0
NUP188-211ENST00000550219 SMAD4Q13485 552 aaKnown RBP15.07■□□□□ 0
NUP188-211ENST00000550219 MTERF2Q49AM1 385 aa15.07■□□□□ 0
NUP188-211ENST00000550219 BLIDQ8IZY5 108 aa15.07■□□□□ 0
NUP188-211ENST00000550219 SPRYD3Q8NCJ5 442 aa15.07■□□□□ 0
NUP188-211ENST00000550219 FBXO18Q8NFZ0 1043 aa15.07■□□□□ 0
NUP188-211ENST00000550219 MICAL1Q8TDZ2 1067 aa15.07■□□□□ 0
NUP188-211ENST00000550219 RIT2Q99578 217 aa15.07■□□□□ 0
NUP188-211ENST00000550219 NRBP2Q9NSY0 501 aa15.07■□□□□ 0
NUP188-211ENST00000550219 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
NUP188-211ENST00000550219 TMEM161AQ9NX61 479 aa15.07■□□□□ 0
NUP188-211ENST00000550219 CD207Q9UJ71 328 aa15.07■□□□□ 0
NUP188-211ENST00000550219 EVPLQ92817 2033 aa15.07■□□□□ 0
NUP188-211ENST00000550219 BDP1A6H8Y1 2624 aa15.06■□□□□ 0
NUP188-211ENST00000550219 FNDC1Q4ZHG4 1894 aaPredicted RBP15.06■□□□□ 0
NUP188-211ENST00000550219 TMEM150BA6NC51 233 aa15.06■□□□□ 0
NUP188-211ENST00000550219 PDIA4P13667 645 aaKnown RBP15.06■□□□□ 0
NUP188-211ENST00000550219 PDCP20941 246 aa15.06■□□□□ 0
NUP188-211ENST00000550219 PLA2G5P39877 138 aa15.06■□□□□ 0
NUP188-211ENST00000550219 GPC3P51654 580 aa15.06■□□□□ 0
NUP188-211ENST00000550219 DSC3Q14574 896 aa15.06■□□□□ 0
NUP188-211ENST00000550219 LARP1BQ659C4 914 aaKnown RBP15.06■□□□□ 0
NUP188-211ENST00000550219 ADHFE1Q8IWW8 467 aa15.06■□□□□ 0
NUP188-211ENST00000550219 ABI1Q8IZP0 508 aa15.06■□□□□ 0
NUP188-211ENST00000550219 LINC01465Q8N7H1 131 aa15.06■□□□□ 0
NUP188-211ENST00000550219 COLGALT1Q8NBJ5 622 aa15.06■□□□□ 0
NUP188-211ENST00000550219 NLRP7Q8WX94 980 aa15.06■□□□□ 0
NUP188-211ENST00000550219 FAM122AQ96E09 287 aa15.06■□□□□ 0
NUP188-211ENST00000550219 C8orf76Q96K31 380 aa15.06■□□□□ 0
NUP188-211ENST00000550219 SH2D3AQ9BRG2 576 aa15.06■□□□□ 0
NUP188-211ENST00000550219 TYW1Q9NV66 732 aaKnown RBP15.06■□□□□ 0
NUP188-211ENST00000550219 DAXXQ9UER7 740 aaPredicted RBP15.06■□□□□ 0
NUP188-211ENST00000550219 PRKAG3Q9UGI9 489 aa15.06■□□□□ 0
NUP188-211ENST00000550219 BARX2Q9UMQ3 279 aaPredicted RBP15.06■□□□□ 0
NUP188-211ENST00000550219 GPR37L1O60883 481 aa15.05■□□□□ -0
NUP188-211ENST00000550219 PSMD10O75832 226 aa15.05■□□□□ -0
NUP188-211ENST00000550219 FGF18O76093 207 aa15.05■□□□□ -0
NUP188-211ENST00000550219 ZSCAN20P17040 1043 aaPredicted RBP15.05■□□□□ -0
NUP188-211ENST00000550219 XBP1P17861 261 aa15.05■□□□□ -0
NUP188-211ENST00000550219 LAG3P18627 525 aa15.05■□□□□ -0
NUP188-211ENST00000550219 SYT1P21579 422 aa15.05■□□□□ -0
NUP188-211ENST00000550219 ADAM15Q13444 863 aa15.05■□□□□ -0
NUP188-211ENST00000550219 DRP2Q13474 957 aa15.05■□□□□ -0
NUP188-211ENST00000550219 NONOQ15233 471 aaKnown RBP eCLIP15.05■□□□□ -0
NUP188-211ENST00000550219 NPY5RQ15761 445 aa15.05■□□□□ -0
NUP188-211ENST00000550219 SMAD2Q15796 467 aaKnown RBP15.05■□□□□ -0
NUP188-211ENST00000550219 CSPP1Q1MSJ5 1256 aa15.05■□□□□ -0
NUP188-211ENST00000550219 INF2Q27J81 1249 aa15.05■□□□□ -0
NUP188-211ENST00000550219 Q4G0T1 1027 aa15.05■□□□□ -0
NUP188-211ENST00000550219 PLPP4Q5VZY2 271 aa15.05■□□□□ -0
NUP188-211ENST00000550219 GALNT17Q6IS24 598 aa15.05■□□□□ -0
NUP188-211ENST00000550219 DAGLBQ8NCG7 672 aa15.05■□□□□ -0
NUP188-211ENST00000550219 PHF20Q9BVI0 1012 aa15.05■□□□□ -0
NUP188-211ENST00000550219 ADAMTS10Q9H324 1103 aa15.05■□□□□ -0
NUP188-211ENST00000550219 TLR9Q9NR96 1032 aa15.05■□□□□ -0
NUP188-211ENST00000550219 GJB4Q9NTQ9 266 aa15.05■□□□□ -0
NUP188-211ENST00000550219 DDX25Q9UHL0 483 aaKnown RBP15.05■□□□□ -0
NUP188-211ENST00000550219 KCNJ14Q9UNX9 436 aa15.05■□□□□ -0
NUP188-211ENST00000550219 PER2O15055 1255 aa15.04■□□□□ -0
NUP188-211ENST00000550219 DCXO43602 365 aa15.04■□□□□ -0
NUP188-211ENST00000550219 CSDE1O75534 798 aaKnown RBP15.04■□□□□ -0
NUP188-211ENST00000550219 GLP2RO95838 553 aa15.04■□□□□ -0
NUP188-211ENST00000550219 ALADP13716 330 aa15.04■□□□□ -0
NUP188-211ENST00000550219 EIF4BP23588 611 aaKnown RBP15.04■□□□□ -0
NUP188-211ENST00000550219 PBX3P40426 434 aa15.04■□□□□ -0
NUP188-211ENST00000550219 LETM2Q2VYF4 491 aa15.04■□□□□ -0
NUP188-211ENST00000550219 KRT25Q7Z3Z0 450 aa15.04■□□□□ -0
NUP188-211ENST00000550219 LRRC43Q8N309 656 aa15.04■□□□□ -0
NUP188-211ENST00000550219 EFHBQ8N7U6 833 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms