RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CSRNP2Q9H175 543 aa21.55■■□□□ 1.04
DDX54-207ENST00000550016 XPNPEP1Q9NQW7 623 aa21.55■■□□□ 1.04
DDX54-207ENST00000550016 BMP2KQ9NSY1 1161 aaPredicted RBP21.55■■□□□ 1.04
DDX54-207ENST00000550016 CFAP45Q9UL16 551 aa21.55■■□□□ 1.04
DDX54-207ENST00000550016 SPTLC2O15270 562 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 ASAP2O43150 1006 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 EYA4O95677 639 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 CD52P31358 61 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 ANP32AP39687 249 aaKnown RBP21.54■■□□□ 1.04
DDX54-207ENST00000550016 GRB10Q13322 594 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 ODR4Q5SWX8 454 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 RHPN2Q8IUC4 686 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 KRI1Q8N9T8 703 aaKnown RBP21.54■■□□□ 1.04
DDX54-207ENST00000550016 PRPF31Q8WWY3 499 aaKnown RBP21.54■■□□□ 1.04
DDX54-207ENST00000550016 CALML4Q96GE6 196 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 PNMA5Q96PV4 448 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 BHMT2Q9H2M3 363 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 PADI3Q9ULW8 664 aa21.54■■□□□ 1.04
DDX54-207ENST00000550016 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.53■■□□□ 1.04
DDX54-207ENST00000550016 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.53■■□□□ 1.04
DDX54-207ENST00000550016 E9PMD0 336 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 RBAK-RBAKDNI3L0D1 243 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 USO1O60763 962 aaKnown RBP21.53■■□□□ 1.04
DDX54-207ENST00000550016 PPP6R2O75170 966 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 RPS6KA5O75582 802 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 EIF4BP23588 611 aaKnown RBP21.53■■□□□ 1.04
DDX54-207ENST00000550016 KCNJ6P48051 423 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 DNM1Q05193 864 aaKnown RBP21.53■■□□□ 1.04
DDX54-207ENST00000550016 PAK2Q13177 524 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 PADI6Q6TGC4 694 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 FAM43BQ6ZT52 329 aaPredicted RBP21.53■■□□□ 1.04
DDX54-207ENST00000550016 ZNF410Q86VK4 478 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 MCPH1Q8NEM0 835 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 TMEM40Q8WWA1 233 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 NLRP7Q8WX94 980 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 ZNF668Q96K58 619 aaPredicted RBP21.53■■□□□ 1.04
DDX54-207ENST00000550016 SCLT1Q96NL6 688 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 CLIC6Q96NY7 704 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 CCSER1Q9C0I3 900 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 NOC2LQ9Y3T9 749 aaKnown RBP21.53■■□□□ 1.04
DDX54-207ENST00000550016 ATP6V1DQ9Y5K8 247 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 COL4A3BPQ9Y5P4 624 aa21.53■■□□□ 1.04
DDX54-207ENST00000550016 TTC3P53804 2025 aa21.52■■□□□ 1.04
DDX54-207ENST00000550016 CYP11B2P19099 503 aa21.52■■□□□ 1.04
DDX54-207ENST00000550016 WDR5P61964 334 aaKnown RBP21.52■■□□□ 1.04
DDX54-207ENST00000550016 NUCB2P80303 420 aa21.52■■□□□ 1.04
DDX54-207ENST00000550016 LAMTOR4Q0VGL1 99 aa21.52■■□□□ 1.04
DDX54-207ENST00000550016 MXD4Q14582 209 aaPredicted RBP21.52■■□□□ 1.04
DDX54-207ENST00000550016 TMEM119Q4V9L6 283 aa21.52■■□□□ 1.04
DDX54-207ENST00000550016 KCNK18Q7Z418 384 aa21.52■■□□□ 1.04
DDX54-207ENST00000550016 KSR1Q8IVT5 923 aa21.52■■□□□ 1.04
DDX54-207ENST00000550016 PHOSPHO2Q8TCD6 241 aa21.52■■□□□ 1.04
DDX54-207ENST00000550016 PLIN2Q99541 437 aa21.52■■□□□ 1.04
DDX54-207ENST00000550016 GCOM2Q9BZD3 368 aaPredicted RBP21.52■■□□□ 1.04
DDX54-207ENST00000550016 ERVK-5Q9HDB9 667 aa21.52■■□□□ 1.04
DDX54-207ENST00000550016 A0A087WZ62 844 aa21.51■■□□□ 1.03
DDX54-207ENST00000550016 GPR182O15218 404 aa21.51■■□□□ 1.03
DDX54-207ENST00000550016 DARSP14868 501 aaKnown RBP21.51■■□□□ 1.03
DDX54-207ENST00000550016 ATP2A2P16615 1042 aaKnown RBP21.51■■□□□ 1.03
DDX54-207ENST00000550016 DDIT3P35638 169 aa21.51■■□□□ 1.03
DDX54-207ENST00000550016 ARL2P36404 184 aa21.51■■□□□ 1.03
DDX54-207ENST00000550016 SMAD3P84022 425 aaKnown RBP21.51■■□□□ 1.03
DDX54-207ENST00000550016 SPECC1Q5M775 1068 aa21.51■■□□□ 1.03
DDX54-207ENST00000550016 EPSTI1Q96J88 318 aa21.51■■□□□ 1.03
DDX54-207ENST00000550016 NLRP4Q96MN2 994 aa21.51■■□□□ 1.03
DDX54-207ENST00000550016 SLC9A7Q96T83 725 aa21.51■■□□□ 1.03
DDX54-207ENST00000550016 FDXACB1Q9BRP7 624 aaPredicted RBP21.51■■□□□ 1.03
DDX54-207ENST00000550016 FTHL17Q9BXU8 183 aa21.51■■□□□ 1.03
DDX54-207ENST00000550016 SRGAP2CP0DJJ0 459 aa21.5■■□□□ 1.03
DDX54-207ENST00000550016 NFX1Q12986 1120 aaKnown RBP21.5■■□□□ 1.03
DDX54-207ENST00000550016 FAM109BQ6ICB4 259 aaPredicted RBP21.5■■□□□ 1.03
DDX54-207ENST00000550016 USP49Q70CQ1 688 aa21.5■■□□□ 1.03
DDX54-207ENST00000550016 MAEAQ7L5Y9 396 aa21.5■■□□□ 1.03
DDX54-207ENST00000550016 FAM228AQ86W67 206 aa21.5■■□□□ 1.03
DDX54-207ENST00000550016 RASSF8Q8NHQ8 419 aa21.5■■□□□ 1.03
DDX54-207ENST00000550016 KCNG4Q8TDN1 519 aa21.5■■□□□ 1.03
DDX54-207ENST00000550016 SYMPKQ92797 1274 aaKnown RBP21.5■■□□□ 1.03
DDX54-207ENST00000550016 INO80BQ9C086 356 aaPredicted RBP21.5■■□□□ 1.03
DDX54-207ENST00000550016 POLR3FQ9H1D9 316 aaPredicted RBP21.5■■□□□ 1.03
DDX54-207ENST00000550016 ST3GAL5Q9UNP4 418 aa21.5■■□□□ 1.03
DDX54-207ENST00000550016 GRXCR1A8MXD5 290 aa21.49■■□□□ 1.03
DDX54-207ENST00000550016 SOX1O00570 391 aaPredicted RBP21.49■■□□□ 1.03
DDX54-207ENST00000550016 CUTAO60888 179 aa21.49■■□□□ 1.03
DDX54-207ENST00000550016 AMHP03971 560 aa21.49■■□□□ 1.03
DDX54-207ENST00000550016 TXLNAP40222 546 aa21.49■■□□□ 1.03
DDX54-207ENST00000550016 DEFB103AP81534 67 aa21.49■■□□□ 1.03
DDX54-207ENST00000550016 KARSQ15046 597 aaKnown RBP21.49■■□□□ 1.03
DDX54-207ENST00000550016 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.49■■□□□ 1.03
DDX54-207ENST00000550016 SYT2Q8N9I0 419 aaPredicted RBP21.49■■□□□ 1.03
DDX54-207ENST00000550016 IFT122Q9HBG6 1241 aa21.49■■□□□ 1.03
DDX54-207ENST00000550016 CCDC39Q9UFE4 941 aa21.49■■□□□ 1.03
DDX54-207ENST00000550016 RCOR1Q9UKL0 485 aa21.49■■□□□ 1.03
DDX54-207ENST00000550016 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.48■■□□□ 1.03
DDX54-207ENST00000550016 ENPP3O14638 875 aa21.48■■□□□ 1.03
DDX54-207ENST00000550016 PLA2G4BP0C869 781 aa21.48■■□□□ 1.03
DDX54-207ENST00000550016 PLCG1P19174 1290 aa21.48■■□□□ 1.03
DDX54-207ENST00000550016 POU5F1BQ06416 359 aa21.48■■□□□ 1.03
DDX54-207ENST00000550016 TFDP1Q14186 410 aa21.48■■□□□ 1.03
DDX54-207ENST00000550016 FAM102BQ5T8I3 360 aa21.48■■□□□ 1.03
DDX54-207ENST00000550016 RINT1Q6NUQ1 792 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms