RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 DGCR2P98153 550 aa5.55□□□□□ -1.52
SNRPF-202ENST00000549580 CEP68Q76N32 757 aa5.55□□□□□ -1.52
SNRPF-202ENST00000549580 CHPFQ8IZ52 775 aa5.55□□□□□ -1.52
SNRPF-202ENST00000549580 CLRN3Q8NCR9 226 aa5.55□□□□□ -1.52
SNRPF-202ENST00000549580 ARRDC4Q8NCT1 418 aa5.55□□□□□ -1.52
SNRPF-202ENST00000549580 CCDC136Q96JN2 1154 aa5.55□□□□□ -1.52
SNRPF-202ENST00000549580 PCGF6Q9BYE7 350 aa5.55□□□□□ -1.52
SNRPF-202ENST00000549580 SLC13A1Q9BZW2 595 aa5.55□□□□□ -1.52
SNRPF-202ENST00000549580 FZD9O00144 591 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 DVL2O14641 736 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 FOXS1O43638 330 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 RFPL1O75677 317 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 PHC1P78364 1004 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 SPIRE1Q08AE8 756 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 NFATC3Q12968 1075 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 KLF1Q13351 362 aaPredicted RBP5.54□□□□□ -1.52
SNRPF-202ENST00000549580 NXNQ6DKJ4 435 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 OTOP3Q7RTS5 596 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 RIOX2Q8IUF8 465 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 TRMT2BQ96GJ1 504 aaKnown RBP5.54□□□□□ -1.52
SNRPF-202ENST00000549580 AHCYL2Q96HN2 611 aaKnown RBP5.54□□□□□ -1.52
SNRPF-202ENST00000549580 FUBP3Q96I24 572 aaKnown RBP eCLIP5.54□□□□□ -1.52
SNRPF-202ENST00000549580 RHOBTB2Q9BYZ6 727 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 TCF7L1Q9HCS4 588 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 SPO11Q9Y5K1 396 aa5.54□□□□□ -1.52
SNRPF-202ENST00000549580 H7C1D1 291 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 PLSCR1O15162 318 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 NARSO43776 548 aaKnown RBP5.53□□□□□ -1.52
SNRPF-202ENST00000549580 ZNF202O95125 648 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 GNAT1P11488 350 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 KRT85P78386 507 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 SMAD3P84022 425 aaKnown RBP5.53□□□□□ -1.52
SNRPF-202ENST00000549580 TERF2Q15554 542 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 SMAD2Q15796 467 aaKnown RBP5.53□□□□□ -1.52
SNRPF-202ENST00000549580 DDB1Q16531 1140 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 ABCB5Q2M3G0 1257 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 NRN1LQ496H8 165 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 GPR158Q5T848 1215 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 FAM102BQ5T8I3 360 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 BROXQ5VW32 411 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 TRMT10BQ6PF06 316 aaKnown RBP5.53□□□□□ -1.52
SNRPF-202ENST00000549580 TMC5Q6UXY8 1006 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 RNF207Q6ZRF8 634 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 ARHGAP36Q6ZRI8 547 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 HDGFL2Q7Z4V5 671 aaPredicted RBP5.53□□□□□ -1.52
SNRPF-202ENST00000549580 NOSTRINQ8IVI9 506 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 WDR75Q8IWA0 830 aaKnown RBP5.53□□□□□ -1.52
SNRPF-202ENST00000549580 DNAJC10Q8IXB1 793 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 CCDC146Q8IYE0 955 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 TCEAL8Q8IYN2 117 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 MYO1HQ8N1T3 1032 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 NUDT10Q8NFP7 164 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 SH3RF2Q8TEC5 729 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 DLG3Q92796 817 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 VOPP1Q96AW1 172 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 NUDT11Q96G61 164 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 EPB41L1Q9H4G0 881 aa5.53□□□□□ -1.52
SNRPF-202ENST00000549580 ZFR2Q9UPR6 939 aaKnown RBP5.53□□□□□ -1.52
SNRPF-202ENST00000549580 MAN2B1O00754 1011 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 NKRFO15226 690 aaKnown RBP eCLIP5.52□□□□□ -1.53
SNRPF-202ENST00000549580 CNOT4O95628 575 aaKnown RBP5.52□□□□□ -1.53
SNRPF-202ENST00000549580 RBP3P10745 1247 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 COL6A2P12110 1019 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 KRT15P19012 456 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 GNALP38405 381 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 IARSP41252 1262 aaKnown RBP5.52□□□□□ -1.53
SNRPF-202ENST00000549580 SLC6A11P48066 632 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 ATXN1P54253 815 aaKnown RBP5.52□□□□□ -1.53
SNRPF-202ENST00000549580 IRF9Q00978 393 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 PTPN21Q16825 1174 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 MROH9Q5TGP6 573 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 CCSAPQ6IQ19 270 aaPredicted RBP5.52□□□□□ -1.53
SNRPF-202ENST00000549580 FSTL4Q6MZW2 842 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 TCTN3Q6NUS6 607 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 RASSF3Q86WH2 238 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 PTRH1Q86Y79 214 aaKnown RBP5.52□□□□□ -1.53
SNRPF-202ENST00000549580 KLHL36Q8N4N3 616 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 C1orf162Q8NEQ5 155 aaPredicted RBP5.52□□□□□ -1.53
SNRPF-202ENST00000549580 TTC8Q8TAM2 541 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 UHMK1Q8TAS1 419 aaKnown RBP5.52□□□□□ -1.53
SNRPF-202ENST00000549580 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.52□□□□□ -1.53
SNRPF-202ENST00000549580 EXTL1Q92935 676 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 CLIC6Q96NY7 704 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 ADOQ96SZ5 270 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 ELF4Q99607 663 aaPredicted RBP5.52□□□□□ -1.53
SNRPF-202ENST00000549580 ZNF180Q9UJW8 692 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 B3GALT1Q9Y5Z6 326 aa5.52□□□□□ -1.53
SNRPF-202ENST00000549580 DGKIO75912 1065 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 LRG1P02750 347 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 MYBL2P10244 700 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 ZSCAN20P17040 1043 aaPredicted RBP5.51□□□□□ -1.53
SNRPF-202ENST00000549580 LSP1P33241 339 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 LRRC32Q14392 662 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 HLTFQ14527 1009 aaKnown RBP eCLIP5.51□□□□□ -1.53
SNRPF-202ENST00000549580 USP39Q53GS9 565 aaKnown RBP5.51□□□□□ -1.53
SNRPF-202ENST00000549580 EMC4Q5J8M3 183 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 TEPPQ6URK8 271 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 C14orf80Q86SX3 495 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 CCAR1Q8IX12 1150 aaKnown RBP5.51□□□□□ -1.53
SNRPF-202ENST00000549580 KIAA1958Q8N8K9 716 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms