RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 PTPRZ1P23471 2315 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 CACNA1AO00555 2505 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 IGKV6D-21A0A0A0MT36 114 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 ZBTB42B2RXF5 422 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 DDX39AO00148 427 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 PLEKHA8P1O95397 391 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 CCNE2O96020 404 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 BCAR1P56945 870 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 CLLU1OSQ5K130 101 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 FAM160B1Q5W0V3 765 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 SWSAP1Q6NVH7 229 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 PDXDC2PQ6P474 469 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 ABHD15Q6UXT9 468 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 OTOP3Q7RTS5 596 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 ECHDC2Q86YB7 292 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 ZNF654Q8IZM8 581 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 HELQQ8TDG4 1101 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 SLC22A17Q8WUG5 538 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 RIN2Q8WYP3 895 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 TMEM169Q96HH4 297 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 CNTNAP3BQ96NU0 1288 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 MAP3K14Q99558 947 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 LZTS2Q9BRK4 669 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 CNTNAP3Q9BZ76 1288 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 AGO4Q9HCK5 861 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 DUSP12Q9UNI6 340 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 TAF6LQ9Y6J9 622 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 LOXHD1Q8IVV2 1947 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 COL1A2P08123 1366 aa12.3□□□□□ -0.44
TRAFD1-206ENST00000549358 FRYLO94915 3013 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 E7EWF7 191 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 NARSO43776 548 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 C22orf31O95567 290 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 CFHP08603 1231 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 ATP4AP20648 1035 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 RFX1P22670 979 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 NLRP11P59045 1033 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 CCDC149Q6ZUS6 474 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 GPR149Q86SP6 731 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 CHD1LQ86WJ1 897 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 CCDC60Q8IWA6 550 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 CKAP2LQ8IYA6 745 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 CCDC82Q8N4S0 544 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 DCLK2Q8N568 766 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 PGBD1Q96JS3 809 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 ZBP1Q9H171 429 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 ZNF302Q9NR11 478 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 WDR87Q6ZQQ6 2873 aa12.29□□□□□ -0.44
TRAFD1-206ENST00000549358 ZFHX4Q86UP3 3567 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 BAZ2BQ9UIF8 2168 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 DDAH1O94760 285 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 GNAQP50148 359 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 ANTXR2P58335 489 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 GIT2Q14161 759 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 CEP55Q53EZ4 464 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 SPECC1Q5M775 1068 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 HEATR3Q7Z4Q2 680 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 TMEM173Q86WV6 379 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 RSAD2Q8WXG1 361 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 RUBCNQ92622 972 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 ZNF668Q96K58 619 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 SFXN1Q9H9B4 322 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 LY9Q9HBG7 655 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 DLL3Q9NYJ7 618 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 WNT16Q9UBV4 365 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 IRAK3Q9Y616 596 aa12.28□□□□□ -0.44
TRAFD1-206ENST00000549358 A0A0U1RQF3 1178 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 KRBA1A5PL33 1030 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 MEIS1O00470 390 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 ZC3H11AO75152 810 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 CTSAP10619 480 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 RXRAP19793 462 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 EIF4BP23588 611 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 PTH1RQ03431 593 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 LETM2Q2VYF4 491 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 DIEXFQ68CQ4 756 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 MIS18BP1Q6P0N0 1132 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 NFXL1Q6ZNB6 911 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 DDX53Q86TM3 631 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 PPFIBP1Q86W92 1011 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 MRPL9Q9BYD2 267 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 ADAMTS10Q9H324 1103 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 IGSF9Q9P2J2 1179 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 CA14Q9ULX7 337 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 AKT3Q9Y243 479 aa12.27□□□□□ -0.45
TRAFD1-206ENST00000549358 ZNF292O60281 2723 aa12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 DCNP07585 359 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 SP9P0CG40 484 aa12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 FGFR4P22455 802 aa12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 KLRC2P26717 231 aa12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 ZNF76P36508 570 aa12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 CLCN3P51790 818 aa12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 POLGP54098 1239 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 NUCB1Q02818 461 aa12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 TBC1D8BQ0IIM8 1120 aa12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 RSPO4Q2I0M5 234 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 LONRF3Q496Y0 759 aa12.26□□□□□ -0.45
TRAFD1-206ENST00000549358 EFCAB12Q6NXP0 572 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms