RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SIX5Q8N196 739 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 STAG2Q8N3U4 1231 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 MED15Q96RN5 788 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 USP28Q96RU2 1077 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 TRIM9Q9C026 710 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 TDRD3Q9H7E2 651 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 GBA2Q9HCG7 927 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 AIPL1Q9NZN9 384 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 KMT2EQ8IZD2 1858 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 KBTBD13C9JR72 458 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 SMAPO00193 183 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 STX10O60499 249 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 CYP11A1P05108 521 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 TPM2P07951 284 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 CYP11B2P19099 503 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 LRPAP1P30533 357 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 HERVK_113P62684 666 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 AMPD3Q01432 767 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 ARID5AQ03989 594 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 NOGQ13253 232 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 ARSHQ5FYA8 562 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 SNX30Q5VWJ9 437 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 PAGE5Q96GU1 130 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 CTAGE1Q96RT6 745 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 PORCNQ9H237 461 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 ADAMTS10Q9H324 1103 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 DBNDD1Q9H9R9 158 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 PNPLA8Q9NP80 782 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 COL20A1Q9P218 1284 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 INPP5FQ9Y2H2 1132 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 TCF20Q9UGU0 1960 aaKnown RBP5.44□□□□□ -1.54
SCAF11-212ENST00000549162 SF3B1O75533 1304 aaKnown RBP eCLIP5.44□□□□□ -1.54
SCAF11-212ENST00000549162 TSPY2A6NKD2 308 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 SFI1A8K8P3 1242 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 DUSP11O75319 330 aaKnown RBP5.44□□□□□ -1.54
SCAF11-212ENST00000549162 PRPF40AO75400 957 aaKnown RBP5.44□□□□□ -1.54
SCAF11-212ENST00000549162 HMGA1P17096 107 aaKnown RBP5.44□□□□□ -1.54
SCAF11-212ENST00000549162 INPP5BP32019 993 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 MAN1A1P33908 653 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 BMP8BP34820 402 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 DAB2P98082 770 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 EARS2Q5JPH6 523 aaKnown RBP5.44□□□□□ -1.54
SCAF11-212ENST00000549162 ODR4Q5SWX8 454 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 RNF187Q5TA31 235 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-212ENST00000549162 APBB2Q92870 758 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 GPR20Q99678 358 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 NUP58Q9BVL2 599 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 C2orf40Q9H1Z8 148 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 BTBD7Q9P203 1132 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 SSU72P8A0A1W2PR75 194 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 TCRBV5S1A1TA0A578 114 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 SLITRK3O94933 977 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 HTR7P34969 479 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 NF2P35240 595 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 HOXD13P35453 343 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 ECE1P42892 770 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 EML3Q32P44 896 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 LARP1BQ659C4 914 aaKnown RBP5.44□□□□□ -1.54
SCAF11-212ENST00000549162 IQUBQ8NA54 791 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 C16orf70Q9BSU1 422 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 BRINP2Q9C0B6 783 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 ASCC2Q9H1I8 757 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-212ENST00000549162 ENAMQ9NRM1 1142 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 SLC5A4Q9NY91 659 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 PCDHGA4Q9Y5G9 962 aa5.44□□□□□ -1.54
SCAF11-212ENST00000549162 PPP1R12BO60237 982 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 B4GALT4O60513 344 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 CHGBP05060 677 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 GABRB2P47870 512 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 PSMC5P62195 406 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 GIT2Q14161 759 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 C5orf22Q49AR2 442 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 SPATA1Q5VX52 437 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 MAPKAPK5Q8IW41 473 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 CCDC155Q8N6L0 562 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 CNNM3Q8NE01 707 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 MCPH1Q8NEM0 835 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 SLC30A5Q8TAD4 765 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 TCP11Q8WWU5 503 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 SLCO2A1Q92959 643 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 NACC1Q96RE7 527 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 PKMYT1Q99640 499 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 PTPN18Q99952 460 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 TMEM206Q9H813 350 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 GGA3Q9NZ52 723 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 COL5A1P20908 1838 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 GSTTP1A0A1W2PQM5 241 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 BICDL2A1A5D9 508 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 FAM92AA1XBS5 289 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 C5orf67F2Z3F1 127 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 N4BP1O75113 896 aaKnown RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 GH2P01242 217 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 POLR3DP05423 398 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 ITGB5P18084 799 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 BMP6P22004 513 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 ATICP31939 592 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 EFNA5P52803 228 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 SEC13P55735 322 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 INCA1Q0VD86 236 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 NAB2Q15742 525 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms