RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 SPIRE1Q08AE8 756 aa17.03■□□□□ 0.32
ARFGAP1-221ENST00000549047 EPHA7Q15375 998 aa17.03■□□□□ 0.32
ARFGAP1-221ENST00000549047 NCAPH2Q6IBW4 605 aa17.03■□□□□ 0.32
ARFGAP1-221ENST00000549047 LXNQ9BS40 222 aa17.03■□□□□ 0.32
ARFGAP1-221ENST00000549047 UBE2ZQ9H832 354 aaPredicted RBP17.03■□□□□ 0.32
ARFGAP1-221ENST00000549047 CYP26B1Q9NR63 512 aa17.03■□□□□ 0.32
ARFGAP1-221ENST00000549047 WRAP73Q9P2S5 460 aaPredicted RBP17.03■□□□□ 0.32
ARFGAP1-221ENST00000549047 TNFRSF10AO00220 468 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 NPEPPSP55786 919 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 FAM189BP81408 668 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 CDC42EP1Q00587 391 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 GUCY1B3Q02153 619 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 TCEAL5Q5H9L2 206 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 FAM102BQ5T8I3 360 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 NECAB3Q96P71 396 aaPredicted RBP17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 LLPHQ9BRT6 129 aaKnown RBP17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 LMAN2LQ9H0V9 348 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 NSUN3Q9H649 340 aaKnown RBP17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 ATP6V0A4Q9HBG4 840 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 TMEM161AQ9NX61 479 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 RGL1Q9NZL6 768 aa17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 SUCLA2Q9P2R7 463 aaPredicted RBP17.02■□□□□ 0.32
ARFGAP1-221ENST00000549047 BRWD1Q9NSI6 2320 aa17.02■□□□□ 0.31
ARFGAP1-221ENST00000549047 NCOR1O75376 2440 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 TBKBP1A7MCY6 615 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 WNT7AO00755 349 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 NEMFO60524 1076 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 CSDE1O75534 798 aaKnown RBP17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 FGFR1P11362 822 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 ZSCAN20P17040 1043 aaPredicted RBP17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 FGFR4P22455 802 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 SAFBQ15424 915 aaKnown RBP eCLIP17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 CALCRLQ16602 461 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 C4orf19Q8IY42 314 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 ZNF579Q8NAF0 562 aaKnown RBP17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 SLC7A3Q8WY07 619 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 P2RX5Q93086 422 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 DYDC2Q96IM9 177 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 CEP170P1Q96L14 293 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 JPH2Q9BR39 696 aaPredicted RBP17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 GCOM2Q9BZD3 368 aaPredicted RBP17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 ELAC1Q9H777 363 aaKnown RBP17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 ALG13Q9NP73 1137 aaKnown RBP17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 PLAGL2Q9UPG8 496 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 EVPLQ92817 2033 aa17.01■□□□□ 0.31
ARFGAP1-221ENST00000549047 A0A087WZ62 844 aa17■□□□□ 0.31
ARFGAP1-221ENST00000549047 CSPG5O95196 566 aa17■□□□□ 0.31
ARFGAP1-221ENST00000549047 KCNA5P22460 613 aa17■□□□□ 0.31
ARFGAP1-221ENST00000549047 YWHABP31946 246 aaKnown RBP17■□□□□ 0.31
ARFGAP1-221ENST00000549047 CYP4A11Q02928 519 aa17■□□□□ 0.31
ARFGAP1-221ENST00000549047 CTTNQ14247 550 aaKnown RBP17■□□□□ 0.31
ARFGAP1-221ENST00000549047 NAALADL2Q58DX5 795 aa17■□□□□ 0.31
ARFGAP1-221ENST00000549047 RHPN2Q8IUC4 686 aa17■□□□□ 0.31
ARFGAP1-221ENST00000549047 C8orf76Q96K31 380 aa17■□□□□ 0.31
ARFGAP1-221ENST00000549047 FDXACB1Q9BRP7 624 aaPredicted RBP17■□□□□ 0.31
ARFGAP1-221ENST00000549047 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
ARFGAP1-221ENST00000549047 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
ARFGAP1-221ENST00000549047 PCDHA12Q9UN75 941 aa17■□□□□ 0.31
ARFGAP1-221ENST00000549047 PPME1Q9Y570 386 aa17■□□□□ 0.31
ARFGAP1-221ENST00000549047 ITGB1P05556 798 aa16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 RBM25P49756 843 aaKnown RBP16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 POLGP54098 1239 aaPredicted RBP16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 SPOUT1Q5T280 376 aaKnown RBP16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 OTUD6AQ7L8S5 288 aa16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 ZNF410Q86VK4 478 aa16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 KSR1Q8IVT5 923 aa16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 KLHL23Q8NBE8 558 aa16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 NLRP4Q96MN2 994 aa16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 MTMR9Q96QG7 549 aa16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 DHX33Q9H6R0 707 aaKnown RBP16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 TTC12Q9H892 705 aaPredicted RBP16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 HCSTQ9UBK5 93 aa16.99■□□□□ 0.31
ARFGAP1-221ENST00000549047 LOXHD1Q8IVV2 1947 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 ZBTB39O15060 712 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 HOXA2O43364 376 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 SLITRK3O94933 977 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 ATP2B1P20020 1258 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 SFPQP23246 707 aaKnown RBP eCLIP16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 DNAJB1P25685 340 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 RFC5P40937 340 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 TXKP42681 527 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 HMGN5P82970 282 aaKnown RBP16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 CAMK1Q14012 370 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 COL19A1Q14993 1142 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 LEXMQ3ZCV2 418 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 ECHDC2Q86YB7 292 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 TPH2Q8IWU9 490 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 EXOC8Q8IYI6 725 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 RNF169Q8NCN4 708 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 SPPL3Q8TCT6 385 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 PABPC5Q96DU9 382 aaKnown RBP16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 EIF2AK1Q9BQI3 630 aaKnown RBP16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 TMEM117Q9H0C3 514 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 BMP2KQ9NSY1 1161 aaPredicted RBP16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 RNF19AQ9NV58 838 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 TYW1Q9NV66 732 aaKnown RBP16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 COL4A3BPQ9Y5P4 624 aa16.98■□□□□ 0.31
ARFGAP1-221ENST00000549047 RALGAPA2Q2PPJ7 1873 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms