RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 EVPLQ92817 2033 aa18.64■□□□□ 0.58
SSH1-208ENST00000548522 EDIL3O43854 480 aa18.64■□□□□ 0.57
SSH1-208ENST00000548522 PSAPP07602 524 aa18.64■□□□□ 0.57
SSH1-208ENST00000548522 SETQ01105 290 aaPredicted RBP18.64■□□□□ 0.57
SSH1-208ENST00000548522 PDE12Q6L8Q7 609 aaKnown RBP18.64■□□□□ 0.57
SSH1-208ENST00000548522 EFCAB12Q6NXP0 572 aa18.64■□□□□ 0.57
SSH1-208ENST00000548522 ECHDC2Q86YB7 292 aa18.64■□□□□ 0.57
SSH1-208ENST00000548522 SMAP1Q8IYB5 467 aaPredicted RBP18.64■□□□□ 0.57
SSH1-208ENST00000548522 GJA10Q969M2 543 aa18.64■□□□□ 0.57
SSH1-208ENST00000548522 ZNF558Q96NG5 402 aa18.64■□□□□ 0.57
SSH1-208ENST00000548522 ZMYND12Q9H0C1 365 aa18.64■□□□□ 0.57
SSH1-208ENST00000548522 TBC1D22BQ9NU19 505 aa18.64■□□□□ 0.57
SSH1-208ENST00000548522 PCDHA10Q9Y5I2 948 aa18.64■□□□□ 0.57
SSH1-208ENST00000548522 ZFHX2Q9C0A1 2572 aaPredicted RBP18.64■□□□□ 0.57
SSH1-208ENST00000548522 ESYT2A0FGR8 921 aa18.63■□□□□ 0.57
SSH1-208ENST00000548522 CSDE1O75534 798 aaKnown RBP18.63■□□□□ 0.57
SSH1-208ENST00000548522 METAP2P50579 478 aaKnown RBP eCLIP18.63■□□□□ 0.57
SSH1-208ENST00000548522 PRKCEQ02156 737 aa18.63■□□□□ 0.57
SSH1-208ENST00000548522 DRP2Q13474 957 aa18.63■□□□□ 0.57
SSH1-208ENST00000548522 PHKBQ93100 1093 aa18.63■□□□□ 0.57
SSH1-208ENST00000548522 MAP7D2Q96T17 732 aa18.63■□□□□ 0.57
SSH1-208ENST00000548522 SMOC2Q9H3U7 446 aa18.63■□□□□ 0.57
SSH1-208ENST00000548522 RNF216Q9NWF9 866 aaPredicted RBP18.63■□□□□ 0.57
SSH1-208ENST00000548522 TCEAL9Q9UHQ7 104 aa18.63■□□□□ 0.57
SSH1-208ENST00000548522 SAMM50Q9Y512 469 aa18.63■□□□□ 0.57
SSH1-208ENST00000548522 FSD2A1L4K1 749 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 CHMP2AO43633 222 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 OATP04181 439 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 EIF4BP23588 611 aaKnown RBP18.62■□□□□ 0.57
SSH1-208ENST00000548522 GPC3P51654 580 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 TSGA10IPQ3SY00 556 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 BMP2KLQ5H9B9 411 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 TMEM173Q86WV6 379 aaPredicted RBP18.62■□□□□ 0.57
SSH1-208ENST00000548522 ABI1Q8IZP0 508 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 FEZF2Q8TBJ5 459 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 HELQQ8TDG4 1101 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 NGRNQ9NPE2 291 aaKnown RBP18.62■□□□□ 0.57
SSH1-208ENST00000548522 CEP131Q9UPN4 1083 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 HCFC2Q9Y5Z7 792 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 VPS13AQ96RL7 3174 aa18.62■□□□□ 0.57
SSH1-208ENST00000548522 TMEM150BA6NC51 233 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 WDR64B1ANS9 1081 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 NT5C1B-RDH14C9J2C7 533 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 MAGEB2O15479 319 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 HOXA2O43364 376 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 WEE2P0C1S8 567 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 SRGAP2BP0DMP2 458 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 RCAN1P53805 252 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 FAM43BQ6ZT52 329 aaPredicted RBP18.61■□□□□ 0.57
SSH1-208ENST00000548522 TMC7Q7Z402 723 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 ZNF598Q86UK7 904 aaKnown RBP18.61■□□□□ 0.57
SSH1-208ENST00000548522 SLC39A11Q8N1S5 342 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 POMKQ9H5K3 350 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 C6orf50Q9HD87 102 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 SPG21Q9NZD8 308 aa18.61■□□□□ 0.57
SSH1-208ENST00000548522 PUF60Q9UHX1 559 aaKnown RBP18.61■□□□□ 0.57
SSH1-208ENST00000548522 NID2Q14112 1375 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 C2orf71A6NGG8 1288 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 C2CD4DB7Z1M9 353 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 MSH4O15457 936 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 DARSP14868 501 aaKnown RBP18.6■□□□□ 0.57
SSH1-208ENST00000548522 ZSCAN20P17040 1043 aaPredicted RBP18.6■□□□□ 0.57
SSH1-208ENST00000548522 CIITAP33076 1130 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 PPM1AP35813 382 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 KANK3Q6NY19 840 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 Q6ZUG5 572 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 ZBTB33Q86T24 672 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 AUTS2Q8WXX7 1259 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 BRF1Q92994 677 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 FAM167AQ96KS9 214 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 SCLT1Q96NL6 688 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 UNC45AQ9H3U1 944 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 DISC1Q9NRI5 854 aa18.6■□□□□ 0.57
SSH1-208ENST00000548522 CLASP2O75122 1294 aaKnown RBP18.59■□□□□ 0.57
SSH1-208ENST00000548522 AVPR2P30518 371 aa18.59■□□□□ 0.57
SSH1-208ENST00000548522 FGD1P98174 961 aa18.59■□□□□ 0.57
SSH1-208ENST00000548522 LONRF3Q496Y0 759 aa18.59■□□□□ 0.57
SSH1-208ENST00000548522 C12orf76Q8N812 135 aaPredicted RBP18.59■□□□□ 0.57
SSH1-208ENST00000548522 MRPL43Q8N983 215 aaKnown RBP18.59■□□□□ 0.57
SSH1-208ENST00000548522 KREMEN2Q8NCW0 462 aa18.59■□□□□ 0.57
SSH1-208ENST00000548522 SH2D3AQ9BRG2 576 aa18.59■□□□□ 0.57
SSH1-208ENST00000548522 VPS54Q9P1Q0 977 aa18.59■□□□□ 0.57
SSH1-208ENST00000548522 A0A0U1RQF3 1178 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 MEIS3P2A8K0S8 358 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 PRPF3O43395 683 aaKnown RBP18.58■□□□□ 0.56
SSH1-208ENST00000548522 BRD1O95696 1058 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 HOXB8P17481 243 aaPredicted RBP18.58■□□□□ 0.56
SSH1-208ENST00000548522 TMOD1P28289 359 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 CA8P35219 290 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 BCAR1P56945 870 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 KRT17Q04695 432 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 KRT32Q14532 448 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 SMC1AQ14683 1233 aaKnown RBP18.58■□□□□ 0.56
SSH1-208ENST00000548522 NTRK3Q16288 839 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 BCL7CQ8WUZ0 217 aaPredicted RBP18.58■□□□□ 0.56
SSH1-208ENST00000548522 NLRP7Q8WX94 980 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 CASP10Q92851 521 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 LPPQ93052 612 aa18.58■□□□□ 0.56
SSH1-208ENST00000548522 JAKMIP1Q96N16 626 aaKnown RBP18.58■□□□□ 0.56
SSH1-208ENST00000548522 CCDC196A0A1B0GTZ2 297 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms