RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 TRAF1Q13077 416 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 STXBP4Q6ZWJ1 553 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 METTL13Q8N6R0 699 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 TPCN2Q8NHX9 752 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 SLC5A5Q92911 643 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 VCPKMTQ9H867 229 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 HMGB2P26583 209 aaKnown RBP17.01■□□□□ 0.31
SCAP-215ENST00000545718 PPP2R5CQ13362 524 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 GRIPAP1Q4V328 841 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 C10orf76Q5T2E6 689 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 MAATS1Q7Z4T9 603 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 BRWD3Q6RI45 1802 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 KRIT1O00522 736 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 FERP16591 822 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 PPFIA1Q13136 1202 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
SCAP-215ENST00000545718 MIER3Q7Z3K6 550 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 FAM151AQ8WW52 585 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 WDR11Q9BZH6 1224 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 RRP15Q9Y3B9 282 aaKnown RBP17.01■□□□□ 0.31
SCAP-215ENST00000545718 TMEM150BA6NC51 233 aa17■□□□□ 0.31
SCAP-215ENST00000545718 IRX5P78411 483 aaPredicted RBP17■□□□□ 0.31
SCAP-215ENST00000545718 MYL7Q01449 175 aa17■□□□□ 0.31
SCAP-215ENST00000545718 DGKZQ13574 1117 aa17■□□□□ 0.31
SCAP-215ENST00000545718 NOC2LQ9Y3T9 749 aaKnown RBP17■□□□□ 0.31
SCAP-215ENST00000545718 F8VZ95 297 aa17■□□□□ 0.31
SCAP-215ENST00000545718 EIF3DO15371 548 aaKnown RBP eCLIP17■□□□□ 0.31
SCAP-215ENST00000545718 ALAS1P13196 640 aa17■□□□□ 0.31
SCAP-215ENST00000545718 SOX5P35711 763 aa17■□□□□ 0.31
SCAP-215ENST00000545718 PRKCIP41743 596 aa17■□□□□ 0.31
SCAP-215ENST00000545718 LNX1Q8TBB1 728 aaPredicted RBP17■□□□□ 0.31
SCAP-215ENST00000545718 ZNF341Q9BYN7 854 aa17■□□□□ 0.31
SCAP-215ENST00000545718 TRIM31Q9BZY9 425 aa17■□□□□ 0.31
SCAP-215ENST00000545718 GDF3Q9NR23 364 aa17■□□□□ 0.31
SCAP-215ENST00000545718 NFIBO00712 420 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 VIL1P09327 827 aaKnown RBP16.99■□□□□ 0.31
SCAP-215ENST00000545718 JAM2P57087 298 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 GNGT1P63211 74 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 PADI6Q6TGC4 694 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 CTNNBL1Q8WYA6 563 aaPredicted RBP16.99■□□□□ 0.31
SCAP-215ENST00000545718 CAPS2Q9BXY5 557 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 INTS2Q9H0H0 1204 aaKnown RBP16.99■□□□□ 0.31
SCAP-215ENST00000545718 RANBP17Q9H2T7 1088 aaKnown RBP16.99■□□□□ 0.31
SCAP-215ENST00000545718 GOLGA8KD6RF30 607 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 MYO1CO00159 1063 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 PGRMC1O00264 195 aaKnown RBP16.99■□□□□ 0.31
SCAP-215ENST00000545718 ITGA4P13612 1032 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 ITGB5P18084 799 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 TNFAIP3P21580 790 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 TTMPQ5BVD1 217 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 SUPT20HQ8NEM7 779 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 IL31RAQ8NI17 732 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 C7orf43Q8WVR3 580 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 PDGFDQ9GZP0 370 aaPredicted RBP16.99■□□□□ 0.31
SCAP-215ENST00000545718 AMACRQ9UHK6 382 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 FRMPD4Q14CM0 1322 aa16.99■□□□□ 0.31
SCAP-215ENST00000545718 ZEB2O60315 1214 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 INPP5BP32019 993 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 ALS2CLQ60I27 953 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 LRRC57Q8N9N7 239 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 LMBR1Q8WVP7 490 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 RUBCNQ92622 972 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 CAVIN3Q969G5 261 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 BORCS6Q96GS4 357 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 KCNH7Q9NS40 1196 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 CHORDC1Q9UHD1 332 aaPredicted RBP16.98■□□□□ 0.31
SCAP-215ENST00000545718 TCEAL9Q9UHQ7 104 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 SART1O43290 800 aaKnown RBP16.98■□□□□ 0.31
SCAP-215ENST00000545718 KRT13P13646 458 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 DLG4P78352 724 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 NNTQ13423 1086 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 FIZ1Q96SL8 496 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 BUB1BO60566 1050 aaPredicted RBP16.98■□□□□ 0.31
SCAP-215ENST00000545718 MYCLP12524 364 aaPredicted RBP16.98■□□□□ 0.31
SCAP-215ENST00000545718 GCLMP48507 274 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 ERVK-9P63128 1117 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 SLC35G2Q8TBE7 412 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 PBKQ96KB5 322 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 MXRA8Q9BRK3 442 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 STK33Q9BYT3 514 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 TAS2R14Q9NYV8 317 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 COL20A1Q9P218 1284 aa16.98■□□□□ 0.31
SCAP-215ENST00000545718 TMEM110-MUSTN1A8MSY1 372 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 EIF2AK2P19525 551 aaKnown RBP16.97■□□□□ 0.31
SCAP-215ENST00000545718 IRAK1P51617 712 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 BFSP1Q12934 665 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 PDCLQ13371 301 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 SRLQ86TD4 932 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 PALB2Q86YC2 1186 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 DPH5Q9H2P9 285 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 UBE2TQ9NPD8 197 aaPredicted RBP16.97■□□□□ 0.31
SCAP-215ENST00000545718 SEL1LQ9UBV2 794 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 AMFRQ9UKV5 643 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 GTPBP10A4D1E9 387 aaKnown RBP16.97■□□□□ 0.31
SCAP-215ENST00000545718 GOLGA8IPA6NC78 632 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 GOLGA8JA6NMD2 632 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 COPB2P35606 906 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 CCT5P48643 541 aa16.97■□□□□ 0.31
SCAP-215ENST00000545718 ZNF746Q6NUN9 644 aaPredicted RBP16.97■□□□□ 0.31
SCAP-215ENST00000545718 DAW1Q8N136 415 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms