RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 BCL7CQ8WUZ0 217 aaPredicted RBP10.72□□□□□ -0.69
CHD4-212ENST00000545083 PGBD1Q96JS3 809 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 SDF4Q9BRK5 362 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 SEMA4AQ9H3S1 761 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 OSBPL3Q9H4L5 887 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 AGO4Q9HCK5 861 aaKnown RBP10.72□□□□□ -0.69
CHD4-212ENST00000545083 SEC63Q9UGP8 760 aaKnown RBP10.72□□□□□ -0.69
CHD4-212ENST00000545083 CHD8Q9HCK8 2581 aa10.72□□□□□ -0.69
CHD4-212ENST00000545083 SPDYE3A6NKU9 549 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 DDX39AO00148 427 aaKnown RBP10.71□□□□□ -0.69
CHD4-212ENST00000545083 N4BP1O75113 896 aaKnown RBP10.71□□□□□ -0.69
CHD4-212ENST00000545083 COL1A2P08123 1366 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 SMARCA1P28370 1054 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 MAP1BP46821 2468 aaKnown RBP10.71□□□□□ -0.69
CHD4-212ENST00000545083 SLC26A2P50443 739 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 BCAR1P56945 870 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 ZNF484Q5JVG2 852 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 B4GALNT3Q6L9W6 998 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 CCDC149Q6ZUS6 474 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 GPR149Q86SP6 731 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 ZNF598Q86UK7 904 aaKnown RBP10.71□□□□□ -0.69
CHD4-212ENST00000545083 ZNF654Q8IZM8 581 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 RSAD2Q8WXG1 361 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 EVPLQ92817 2033 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 ACSF2Q96CM8 615 aaPredicted RBP10.71□□□□□ -0.69
CHD4-212ENST00000545083 ZNF668Q96K58 619 aaPredicted RBP10.71□□□□□ -0.69
CHD4-212ENST00000545083 IRAK3Q9Y616 596 aa10.71□□□□□ -0.69
CHD4-212ENST00000545083 CHD6Q8TD26 2715 aa10.71□□□□□ -0.7
CHD4-212ENST00000545083 E7EWF7 191 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 HIP1O00291 1037 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 BACH1O14867 736 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 DDAH1O94760 285 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 CFHP08603 1231 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 CTSAP10619 480 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 RXRAP19793 462 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 CLCN3P51790 818 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 PTH1RQ03431 593 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 PDXDC2PQ6P474 469 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 OTOP3Q7RTS5 596 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 CABP7Q86V35 215 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 MB21D2Q8IYB1 491 aaPredicted RBP10.7□□□□□ -0.7
CHD4-212ENST00000545083 METTL13Q8N6R0 699 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 CTCFLQ8NI51 663 aaPredicted RBP10.7□□□□□ -0.7
CHD4-212ENST00000545083 TMEM169Q96HH4 297 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 MAP3K14Q99558 947 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 HINFPQ9BQA5 517 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 VN1R3Q9BXE9 311 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 ADAMTS10Q9H324 1103 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 TBC1D17Q9HA65 648 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 LY9Q9HBG7 655 aa10.7□□□□□ -0.7
CHD4-212ENST00000545083 MEIS1O00470 390 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 STK25O00506 426 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 DHX15O43143 795 aaKnown RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 ZC3H11AO75152 810 aaKnown RBP eCLIP10.69□□□□□ -0.7
CHD4-212ENST00000545083 DCNP07585 359 aaKnown RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 SP9P0CG40 484 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 ZSCAN20P17040 1043 aaPredicted RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 FGFR4P22455 802 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 KIF5BP33176 963 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 ALDH7A1P49419 539 aaKnown RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 NLRP11P59045 1033 aaKnown RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 SART3Q15020 963 aaKnown RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 PTPN14Q15678 1187 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 RSPO4Q2I0M5 234 aaPredicted RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 CEP55Q53EZ4 464 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 SPECC1Q5M775 1068 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 FAM160B1Q5W0V3 765 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 SWSAP1Q6NVH7 229 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 TRMT1LQ7Z2T5 733 aaKnown RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 RALYLQ86SE5 291 aaKnown RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 DDX53Q86TM3 631 aaKnown RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 RAB11FIP4Q86YS3 637 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 SMC5Q8IY18 1101 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 LINC01465Q8N7H1 131 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 SUMF1Q8NBK3 374 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 NCOA7Q8NI08 942 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 RUBCNQ92622 972 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 LZTS2Q9BRK4 669 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 SFXN1Q9H9B4 322 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 ZNF302Q9NR11 478 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 DLGAP2Q9P1A6 1054 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 WNT16Q9UBV4 365 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 CA14Q9ULX7 337 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 U3KPZ7 1027 aaPredicted RBP10.69□□□□□ -0.7
CHD4-212ENST00000545083 CACNA1IQ9P0X4 2223 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 CFAP47Q6ZTR5 3102 aa10.69□□□□□ -0.7
CHD4-212ENST00000545083 USP24Q9UPU5 2620 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 A0A0U1RQF3 1178 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 POTEMA6NI47 508 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 B4GALT3O60512 393 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 GLULP15104 373 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 EIF4BP23588 611 aaKnown RBP10.68□□□□□ -0.7
CHD4-212ENST00000545083 CLCN4P51793 760 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 POLGP54098 1239 aaPredicted RBP10.68□□□□□ -0.7
CHD4-212ENST00000545083 LETM2Q2VYF4 491 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 TYW1BQ6NUM6 668 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 POTEGQ6S5H5 508 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 CHD1LQ86WJ1 897 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 LRRC71Q8N4P6 559 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms