RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 FOXD4L6Q3SYB3 417 aaPredicted RBP18.74■□□□□ 0.59
PDCD2-213ENST00000544866 TMEM119Q4V9L6 283 aa18.74■□□□□ 0.59
PDCD2-213ENST00000544866 FOXD4L3Q6VB84 417 aaPredicted RBP18.74■□□□□ 0.59
PDCD2-213ENST00000544866 CABP7Q86V35 215 aa18.74■□□□□ 0.59
PDCD2-213ENST00000544866 LINC00301Q8NCQ3 95 aa18.74■□□□□ 0.59
PDCD2-213ENST00000544866 LRCH3Q96II8 777 aa18.74■□□□□ 0.59
PDCD2-213ENST00000544866 ATP6V0A4Q9HBG4 840 aa18.74■□□□□ 0.59
PDCD2-213ENST00000544866 TFIP11Q9UBB9 837 aaKnown RBP18.74■□□□□ 0.59
PDCD2-213ENST00000544866 ARHGEF35A5YM69 484 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 GRXCR1A8MXD5 290 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 E9PMD0 336 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 SLC26A4O43511 780 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 EFCAB14O75071 495 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 DDIT3P35638 169 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 DEFB103AP81534 67 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 SMAD3P84022 425 aaKnown RBP18.73■□□□□ 0.59
PDCD2-213ENST00000544866 CDC42EP1Q00587 391 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 PAK2Q13177 524 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 STK38Q15208 465 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 PADI6Q6TGC4 694 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 FAM228AQ86W67 206 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 RHPN2Q8IUC4 686 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 KSR1Q8IVT5 923 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 TCP11Q8WWU5 503 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 PRPF31Q8WWY3 499 aaKnown RBP18.73■□□□□ 0.59
PDCD2-213ENST00000544866 PSPC1Q8WXF1 523 aaKnown RBP18.73■□□□□ 0.59
PDCD2-213ENST00000544866 LINC01599Q8WXQ3 324 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 CLIC6Q96NY7 704 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 SLC9A7Q96T83 725 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 CSRNP2Q9H175 543 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 BHMT2Q9H2M3 363 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 ERVK-5Q9HDB9 667 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 COL4A3BPQ9Y5P4 624 aa18.73■□□□□ 0.59
PDCD2-213ENST00000544866 TRANK1O15050 2925 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.72■□□□□ 0.59
PDCD2-213ENST00000544866 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.72■□□□□ 0.59
PDCD2-213ENST00000544866 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.72■□□□□ 0.59
PDCD2-213ENST00000544866 RPS6KA5O75582 802 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 YEATS4O95619 227 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 EYA4O95677 639 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 DARSP14868 501 aaKnown RBP18.72■□□□□ 0.59
PDCD2-213ENST00000544866 EIF4BP23588 611 aaKnown RBP18.72■□□□□ 0.59
PDCD2-213ENST00000544866 ARL2P36404 184 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 UBA7P41226 1012 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 KCNJ6P48051 423 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 ZRSR1Q15695 479 aaKnown RBP18.72■□□□□ 0.59
PDCD2-213ENST00000544866 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.72■□□□□ 0.594e-10■■■■□ 20
PDCD2-213ENST00000544866 USP49Q70CQ1 688 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 ZNF410Q86VK4 478 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 NLRP7Q8WX94 980 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 NT5C3AQ9H0P0 336 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 TMX1Q9H3N1 280 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 DAXXQ9UER7 740 aaPredicted RBP18.72■□□□□ 0.59
PDCD2-213ENST00000544866 DNM3Q9UQ16 869 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 CDH23Q9H251 3354 aa18.72■□□□□ 0.59
PDCD2-213ENST00000544866 MYO9BQ13459 2157 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 A0A087WZ62 844 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 SPTLC2O15270 562 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 ATP2A2P16615 1042 aaKnown RBP18.71■□□□□ 0.59
PDCD2-213ENST00000544866 CYP11B2P19099 503 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 DNM1Q05193 864 aaKnown RBP18.71■□□□□ 0.59
PDCD2-213ENST00000544866 LAMTOR4Q0VGL1 99 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 SPECC1Q5M775 1068 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 ATL3Q6DD88 541 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 KCTD17Q8N5Z5 321 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 KRI1Q8N9T8 703 aaKnown RBP18.71■□□□□ 0.59
PDCD2-213ENST00000544866 PHOSPHO2Q8TCD6 241 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 ASAP3Q8TDY4 903 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 LRRC15Q8TF66 581 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 EPSTI1Q96J88 318 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 CDK5RAP3Q96JB5 506 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 SCLT1Q96NL6 688 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 PLIN2Q99541 437 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 FDXACB1Q9BRP7 624 aaPredicted RBP18.71■□□□□ 0.59
PDCD2-213ENST00000544866 CCSER1Q9C0I3 900 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 IFT122Q9HBG6 1241 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 ST3GAL5Q9UNP4 418 aa18.71■□□□□ 0.59
PDCD2-213ENST00000544866 PPP6R2O75170 966 aa18.7■□□□□ 0.58
PDCD2-213ENST00000544866 KARSQ15046 597 aaKnown RBP18.7■□□□□ 0.58
PDCD2-213ENST00000544866 TMCO2Q7Z6W1 182 aaPredicted RBP18.7■□□□□ 0.58
PDCD2-213ENST00000544866 RTN4RL1Q86UN2 441 aaPredicted RBP18.7■□□□□ 0.58
PDCD2-213ENST00000544866 MCPH1Q8NEM0 835 aa18.7■□□□□ 0.58
PDCD2-213ENST00000544866 SYMPKQ92797 1274 aaKnown RBP18.7■□□□□ 0.58
PDCD2-213ENST00000544866 NLRP4Q96MN2 994 aa18.7■□□□□ 0.58
PDCD2-213ENST00000544866 FTHL17Q9BXU8 183 aa18.7■□□□□ 0.58
PDCD2-213ENST00000544866 PBX4Q9BYU1 374 aa18.7■□□□□ 0.58
PDCD2-213ENST00000544866 GCOM2Q9BZD3 368 aaPredicted RBP18.7■□□□□ 0.58
PDCD2-213ENST00000544866 POLR3FQ9H1D9 316 aaPredicted RBP18.7■□□□□ 0.58
PDCD2-213ENST00000544866 GPRC5CQ9NQ84 441 aa18.7■□□□□ 0.58
PDCD2-213ENST00000544866 GPR182O15218 404 aa18.69■□□□□ 0.58
PDCD2-213ENST00000544866 ASAP2O43150 1006 aa18.69■□□□□ 0.58
PDCD2-213ENST00000544866 MGEA5O60502 916 aa18.69■□□□□ 0.58
PDCD2-213ENST00000544866 CSDE1O75534 798 aaKnown RBP18.69■□□□□ 0.58
PDCD2-213ENST00000544866 GLRA2P23416 452 aa18.69■□□□□ 0.58
PDCD2-213ENST00000544866 PBX2P40425 430 aa18.69■□□□□ 0.58
PDCD2-213ENST00000544866 NFX1Q12986 1120 aaKnown RBP18.69■□□□□ 0.58
PDCD2-213ENST00000544866 CAPSQ13938 189 aa18.69■□□□□ 0.58
PDCD2-213ENST00000544866 MXD4Q14582 209 aaPredicted RBP18.69■□□□□ 0.58
PDCD2-213ENST00000544866 FAM102BQ5T8I3 360 aa18.69■□□□□ 0.58
PDCD2-213ENST00000544866 MAEAQ7L5Y9 396 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms